Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 286 9e-72 seq1 84.2 6e-11 >seq8 Length=411764 Score = 286 bits (316), Expect = 9e-72 Identities = 631/929 (68%), Gaps = 24/929 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 |||||| ||||| |||||||| || ||||| || | | | || ||||| ||| Sbjct 37591 AAGACGCTGGAGCGTTCCTACCTGCTACGGATCAACGGCAAGGTCGCGGAGCGCCCCCAG 37532 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | |||||||| ||||| || ||||| || |||||| | |||||| || Sbjct 37531 CACATGCTTATGCGTGTCGCTATGGGCATCCACGGCGAGGATGTGAAGAGCGCGATCGAG 37472 Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTATTCACGCACGCCACGCCAACAATGTACAATG 363577 || || || |||| | || | | | || |||||||| |||| || ||| ||||| Sbjct 37471 ACGTACAA-CTTC-ATGTCCGAGAAGGCCTTTACGCACGCGTCGCCGACCCTGTTCAATG 37414 Query 363578 CTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCA 363637 |||| || | || || || ||||| || ||||| ||| | | ||||||||||| || | Sbjct 37413 CTGGCACGCCCAACCCCCAAATGTCGTCCTGCTTCCTTGTGAGCATGAAGGACGACTCGA 37354 Query 363638 TCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAA 363697 | |||||||| | |||||| ||||||| ||||| | || ||||| || || || | Sbjct 37353 TTGAGGGTATTTATGACACGCTTAAGACGTGTGCGATGATCAGCAAGACGGCCGGTGGTA 37294 Query 363698 TTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCAC-AGGGGGA 363756 |||| | |||||||| | || || | | |||||| ||| || | || Sbjct 37293 TTGGCCTGAACATCCACAACATCCGCGCGACGGGCTCGTACATTGCCGGTACGAACGGTG 37234 Query 363757 TACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGAC 363816 | | || || | || ||||||||||| |||| |||| || ||| | ||||| ||| Sbjct 37233 TGAGC-AACGGTATTGTGCCCATGCTTCGCGTGTACAACAACACAGCGCGCTACGTGGAC 37175 Query 363817 CAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGAT 363876 |||||||| |||||| || || ||||| || || || ||||| || | || Sbjct 37174 CAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCGATTTACCTGGAGCCATGGCACTCGGAC 37115 Query 363877 ATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGAT 363936 | |||||||| |||| || || || ||| || || ||||| ||||||| || || Sbjct 37114 GTGTTTGAGTTCATTGATCTGCGCAAGAACCATGGTAAGGAGGAGGTGCGTGCGCGCGAC 37055 Query 363937 CTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG-AA 363995 |||||| || || |||||| | ||| || ||| ||||| || |||| | | Sbjct 37054 CTGTTCCTGGCGCTGTGGGTTCCCGACTTGTTCATGCGCCGCGTTGA-GCAGAACGGCGA 36996 Query 363996 TTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACGAC 364053 ||||| || | ||||| || || || || || |||| || ||| ||||| || Sbjct 36995 CTGGTCGCTGATGTGCCCCGCTGAGTGCCCGGGCCTGGCCGACTGCTAT--GGTGAGGAG 36938 Query 364054 TATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG---ACAATTCCC 364110 | || |||||| ||||| || || || ||||| || ||| | || Sbjct 36937 TTTGATGCTCTGTACGAGAAATACGAGCGCGAGGGCCGCGC---CAAGCGCTCTGTTAAG 36881 Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||||| |||| ||||| | || ||||||| ||||| || | |||| || Sbjct 36880 GCGCAGAAGCTGTGGTACGCCATTCTCGAGGCGCAGATCGAGACGGGCAACCCCTTCATC 36821 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||| || ||| ||||||||| ||||||| || |||| || || | ||| || Sbjct 36820 CTGTACAAGGACTCGGCAAACCGCAAGAGCAACCAGAAGAACCTGGGCACGA-TCA--AG 36764 Query 364231 AGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGT 364287 ||| ||| | || || |||||||| || |||| | | || |||||||| || || || Sbjct 36763 AGCTCGAACTTGTGCACGGAGATTATCGAGTACAGCTCGCCGGACGAGACGGCTGTGTGC 36704 Query 364288 AACCTTGCGTCGATCGCGCTTCCGGCGTT 364316 ||||| || || || ||||| ||| |||| Sbjct 36703 AACCTGGCATCAATTGCGCTGCCGACGTT 36675 >seq1 Length=1477453 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 371463 GTCATGCGTGATGGGATGGCATGTGGATTGATGATAATATCGGGTGCAACTCCGTCGGCT 371522 |||||||| || |||| | |||| || || |||||||| ||||| | || ||| | Sbjct 620742 GTCATGCGCGACGGGAAGCCATGGGGGTTCATGATAATGTCGGGGTGGATGCCCTCGTCG 620683 Query 371523 GTGCATGGAAAGTCGGC-TGCTGGCATAGTGACGCCACACACACCTTTTTGCCCGTGCCT 371581 ||| | || ||||| | ||| |||| | | | |||||||||||| ||||| ||||| | Sbjct 620682 GTGAACGGCAAGTCTTCCTGC-GGCACAATCAGGCCACACACACCCTTTTGGCCGTGGCG 620624 Query 371582 GGCCGAGAATTTGTCGCC 371599 | |||||||||||||| Sbjct 620623 CGAGGAGAATTTGTCGCC 620606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353299414076