Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8 122 1e-22 >seq8 Length=411764 Score = 122 bits (134), Expect = 1e-22 Identities = 609/960 (63%), Gaps = 10/960 (1%) Strand=Plus/Plus Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 |||| || || || ||| | || ||||||| |||||| || |||| | || || || Sbjct 36958 CCAGGCCCGGGCACTCAGCGGGGCACATCAGCGACCAGTCGCCGTTCTGCTCAACGCGGC 37017 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 ||| || | || |||| ||| || || | || || || | | | ||||| | Sbjct 37018 GCATGAACAAGTCGGGAACCCACAGCGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCT 37077 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || ||||| ||||| | |||| | | | || || ||||| || |||| || Sbjct 37078 TACCATGGTTCTTGCGCAGATCAATGAACTCAAACACGTCCGAGTGCCATGGCTCCAGGT 37137 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | || || | | || || || ||||| || ||||| || | ||| | || ||||| | Sbjct 37138 AAATCGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGT 37197 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | || || | | ||| || | |||||| ||| ||| || || || | || || Sbjct 37198 TGTACACGCGAAGCATGGGCACAATACCGTTGCTCACACCGTTCGTACCGGCAATGTACG 37257 Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || | || || || || || || || || || || ||| | || ||| | Sbjct 37258 AGCCCGTCGCGCGGATGTTGTGGATGTTCAGGCCAATACCACCGGCCGTCTTGCTGATCA 37317 Query 63378 ATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436 || || ||| |||| ||| ||||| || ||||| || || ||| ||||| | | Sbjct 37318 TCGCACA-CGTCTTAAGCGTGTCATAAATACCCTCAATCGAGTCGTCCTTCATGCTCACA 37376 Query 63437 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63496 || || ||| ||||||||| | || || ||||| || | ||| || || ||| Sbjct 37377 AGGAAGCAGGACGACATTTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCG 37436 Query 63497 TGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556 || ||||| || || || | | ||||||||||| || || | | |||| Sbjct 37437 TGCGTAAAGGCCTTCTCGGACATGAAGTTGTACGTCTCGATCGCGCTCTTCACATCCTCG 37496 Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616 || || || | ||||||||||| | ||||||||| || | || ||| |||| | Sbjct 37497 CCGTGGATGCCCATAGCGACACGCATAAGCATGTGCTGGGGGCGCTCCGCGACCTTGCCG 37556 Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676 || || | || |||||| |||| || || || ||||| ||||||| |||| Sbjct 37557 TTGATCCGTAGCAGGTAGGAACGCTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGAAAG 37616 Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 63736 || || ||||| || | |||||| ||| | || | || | || | || Sbjct 37617 TCGCGCTCGTAGATGACGGCCGAGTCGAGCGTGTCGCGGTTCTTCATCACGGCCTCGTAC 37676 Query 63737 GTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAA 63795 || | ||| || || ||||| ||||||| | || || || ||||||| | | | Sbjct 37677 GT-CTCCTTGGAGATCATAGGGCTGTGTTTCCTCGTCTTGGGGTTCACATAGTCGTACAG 37735 Query 63796 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGATACGGCT 63853 || | || ||| | ||||| | || || ||||| ||||| || || |||| || Sbjct 37736 GTCTTGCACCACATGGCTAAAGTGCTTCTTGGTTTCCTTGTGCAGGTTGCTGAT--TGCG 37793 Query 63854 ATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTC 63912 || | || || || | ||| || || || || ||||| | || || || | || Sbjct 37794 ATACGCGCCGCGAGCACGGCGTAGTCTGGGTGGGTGGTAGT-CTTGTACGCCGCCGTCTC 37852 Query 63913 GGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTT 63972 || || ||| |||||| ||| ||||| || ||||| | || || || | ||| || || Sbjct 37853 AGCCGCGAGATTGTCCAGTTCGACCGTGGTCACACCCTCGTAGATGCCATCGATCACTTT 37912 Score = 95.1 bits (104), Expect = 2e-14 Identities = 162/232 (70%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734 ||| || |||||||| | || | ||||| || |||| || |||||||| ||||| Sbjct 49318 GTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCC 49259 Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794 ||| || || |||||||| ||||| || || || || || || || || || || || || Sbjct 49258 ACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCCTCGACAGC 49199 Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATAACC-GGCGC---TGTCATGTATCCACTTTTGAG 32850 ||||| || | || | ||| | | ||| ||||| |||| ||||| | | Sbjct 49198 GGCAAAAGCGACCAGGCGCTC-CGAGAACGAGGCGCGCTTGTCCGAGATCCAGCGCAGGG 49140 Query 32851 CCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 |||| |||||||| | || || ||| || ||||| || ||||||||||| Sbjct 49139 CCCACTCGGCCTTTTGCTTGACGACAGGGATAGTCTCGATGGCATTAAAGAG 49088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631857432800