Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 seq4 96.9 3e-15 >seq6 Length=598762 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| | ||||| || | ||||| | || |||||||| || Sbjct 366841 ATGCAAGTCTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 366900 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| || || || || || |||||| Sbjct 366901 GACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 366960 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| |||||| || |||| ||||| Sbjct 366961 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 367020 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || || | ||||| Sbjct 367021 ATCCAGAAGGAGAGCACTCTCCACCTTGTGCT 367052 >seq4 Length=1186009 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| |||| || || | ||||| | || || ||||| || Sbjct 398029 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACCCTTGAGGTCGAGTCTTCG 398088 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || ||||| || |||| Sbjct 398089 GACACGATCGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 398146 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || || || || | || |||| ||||| || |||| |||| Sbjct 398147 AACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACA 398206 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| || || ||| || || | ||||| Sbjct 398207 ACATTCAGAAGGAGAGCACCCTGCACCTCGTGCT 398240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327904938670