Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 132 1e-25 seq3 132 1e-25 >seq8 Length=411764 Score = 132 bits (146), Expect = 1e-25 Identities = 393/596 (66%), Gaps = 19/596 (3%) Strand=Plus/Minus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 || ||||| || || || || |||||||||| || || || |||||| ||||| ||| Sbjct 49608 ACGCGGCGCTCAAAAAAGTTTGACTTGCCCTGGAGCGAAATGTTCTCCATAAAGTCAAAG 49549 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| | | ||||| ||||||| | ||| || || | | |||||| |||||| Sbjct 49548 GGGTTCGCCGAGTTGTAGTGCTTGGAGTTGCCGAGGTTGACAAGCAGGCGGTCCGCCACA 49489 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | ||| || | ||||||||| |||| ||| | ||| | || Sbjct 49488 AACTCAATGTACTGGCACATGAGGCGGGCGTTCATGCCGATCA-GCGAGACAGGCAGGGC 49430 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 || | || |||| || | || || ||||| | ||| |||||| ||| Sbjct 49429 GTCGGTCAAAAAGTCCTGCTCAATAGCCACGGCCTCAGTGATAATGCGGTTCACC-GTGT 49371 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGA 251850 | | | || | |||| ||| | | ||| || || || |||| | | |||||| Sbjct 49370 CGGGGTGCGCGCGCTTCTTCAGGTGGCTGAACAAGAGGCACG-CAAAGTCTGTGTGCAGG 49312 Query 251851 CCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTC 251910 |||||||| || ||||| |||||| || | |||||| ||||| | ||||| ||| Sbjct 49311 CCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCACGTTTC 49252 Query 251911 CTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCAT 251970 ||||||| ||||| | | || || || ||||| | | |||||||||| | | Sbjct 49251 TTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCCTCGACAGCGGCAAAA 49192 Query 251971 GCAACAAGGCGCTCAGCAAACGA------CTTGTCCTGCGACAAGAACTTCTGTGCCCAT 252024 || || |||||||| | ||||| |||||| ||| | | | | ||||| Sbjct 49191 GCGACCAGGCGCTCCGAGAACGAGGCGCGCTTGTC---CGAGATCCAGCGCAGGGCCCAC 49135 Query 252025 GCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCG 252084 | ||||| | || | ||||| || ||||| |||| |||||| | | ||| | Sbjct 49134 TCGGCCTTTTGCTTGACGACAGGGATAGTCTCGATGGCATTAAAGAGGAACT--CGCGCT 49077 Query 252085 GCATCG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 || || || |||| || || | ||||| |||||| ||||||| |||||| Sbjct 49076 GCTCCGGCTCGCGGATGTACGTGTCGATGAGGAGTGAGTACGTCTCCGAGTGGATG 49021 >seq3 Length=1325307 Score = 132 bits (146), Expect = 1e-25 Identities = 403/615 (66%), Gaps = 22/615 (4%) Strand=Plus/Minus Query 218402 GCGAGCTCATCGACCGATCTTTCAACAAGTCTCGTCCTGATGAGCGCAAGACCTGGCTGC 218461 |||| ||| | |||| | ||||||||| | ||||| |||||| ||||||| Sbjct 270498 GCGATCTCGTGGACCTCGCGTTCAACAAGAAAAAGGCCGATGACCGCAAGGAGTGGCTGC 270439 Query 218462 TCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGAC-CAACATCCCCGTCCCTGAC 218520 | | || ||| || | | | | ||||| || | | | | |||||| || | ||| Sbjct 270438 GCCAGTTTGTGCCGGGCACCTACCTTGACCAC-CGCATCCGCCAGATCCCCATCTCGGAC 270380 Query 218521 TTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTGGAGCGTTCTATTCC 218576 || ||| |||| || || || || ||||| |||| | || | || || || || Sbjct 270379 TTTATCAACAAAGAACTGATCCTCTTCTCCATGGCGG-ACAATATC---CGCTCGATCCC 270324 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 |||||| || ||||||||||| || ||||| ||| |||| || | | |||||||| Sbjct 270323 CAGCGTCGTCGATGGCCTCAAACCGGGCCAGCGCAAGGTCCTGTTCGGCTGCTTCAAGCG 270264 Query 218637 GAACCTGGTTCAAGA----AATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTT 218692 ||||| ||||| ||| ||||| ||| | || || || || || Sbjct 270263 CAACCT----CAAGACGGAAATCAAGGTGCAACAGCTGCAGGGCTACGTGTCGGAGCACA 270208 Query 218693 CTGGCTACCATCACGGTGAGCAGAGTCTG--CAGGGTGCCATTGTAGGCATGGCACAGGA 218750 | | ||||| ||||| || ||||||||| || | | || || || | ||||| || Sbjct 270207 CGGCGTACCACCACGGCGACCAGAGTCTGGTCATGACG--ATCGTCGGTCTCGCACAAGA 270150 Query 218751 CTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCT 218810 || | ||||| ||||| |||| |||| | |||||||| ||||||||| | ||| Sbjct 270149 CTTTTGCGGCAGCAACAATGTGAATATGCTCATGCCCAACGGCCAGTTTGGTACGCGTAG 270090 Query 218811 ATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGAC 218870 |||| || |||||| || ||| | || || || || || ||| | | || Sbjct 270089 TATGGGCGGCAAGGATGCGGCCAGCGCCCGTTACATTTTCACTGCCGTGCCGCGCATTAC 270030 Query 218871 GCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTC 218930 ||||||| | ||| ||| | || || | ||| || || || ||||| || || || Sbjct 270029 GCGCCAGCTCTTCCATCCGAAGGACGACGCGCTGCTCAACTACCTTGACGAGGACGGGCA 269970 Query 218931 TTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAA 218990 || |||||||||||||| ||||| | | ||| ||||| | || || ||| | Sbjct 269969 GAGCATCGAGCCCGAGTGGTACGTGCCGGTCGTACCGCAGGTGCTCCTCAACGGCGCCGA 269910 Query 218991 TGGTATCGGGACAGG 219005 |||||||| || || Sbjct 269909 CGGTATCGGCACGGG 269895 Score = 96.9 bits (106), Expect = 7e-15 Identities = 138/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 |||||||||||||||||||||||||| || || | || ||| | || | ||||| Sbjct 389722 CTGTCGGGTGGTTGGAAGATGAAGCTCGCTCTGGCCCGTGCCGTGCTCTTCAAGGCCGAC 389663 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || ||||| |||||||| ||||||||| ||||| || |||||| |||||| | | Sbjct 389662 ATTCTGCTGCTGGATGAGCCGACCAACCACTTGGACGTCATCAACGTGGCCTGGATCACG 389603 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| || || || || | || ||||||| || |||||||| ||| Sbjct 389602 GACTACCTGCGCA---CGACGAGTGCCACCTCGATCATTGTGTCGCACGACTCCAAGTTC 389546 Query 279885 CTAGATGCCGTGTG 279898 || | | |||||| Sbjct 389545 CTGAACGACGTGTG 389532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836562955138