Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4 118 3e-21 seq6 116 9e-21 seq3 86.0 1e-11 >seq4 Length=1186009 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| ||||| || | ||||| || || || || || |||||| || ||||| || || Sbjct 398241 AAGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATC 398182 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | || || || |||||||||||||||||||| || || || || || || Sbjct 398181 CTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 398122 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 |||||| || || || || || || || | || || || || || || |||||||| Sbjct 398121 CTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGT 398062 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||||||||||||||| || ||||| Sbjct 398061 CTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 398029 >seq6 Length=598762 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || |||||| Sbjct 367067 CCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 367008 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || |||||||| |||||||| ||| Sbjct 367007 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 366948 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || || || || || | ||| || || || Sbjct 366947 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACC 366888 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||||||||| || ||||||||||| | ||||| Sbjct 366887 TCAAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAAGACTTGCAT 366841 >seq3 Length=1325307 Score = 86.0 bits (94), Expect = 1e-11 Identities = 235/352 (67%), Gaps = 10/352 (3%) Strand=Plus/Plus Query 326029 GAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGAT 326088 || |||||| |||| || || ||||| | || |||| ||| |||||||||||| Sbjct 270767 GAGAAAGTTGATGATCAGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCGGTCATGAT 270826 Query 326089 CATCACATGACCGTAACGAAG--CGAGGACG-TGTCTTTGTACACTTTACCGGTTTGAAG 326145 ||||| ||||| || || | ||| |||| || || || ||| || || Sbjct 270827 CATCAGGCTGCCGTAGCGCAGGCCATCAACGCTGTC---ATAGACCTTGCCGTGCTGCAG 270883 Query 326146 GCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG-GAT 326203 |||||||| | |||| | ||| |||| || |||||||| |||| || | | | || Sbjct 270884 CCCGAGAATCTCCTTGATGTGCT-TGATCTCGGCGTTCTTCATGAT-CTGGTCGTGCGAC 270941 Query 326204 GCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 326263 || ||||| || || | | || || || || |||||||| || || |||||||| Sbjct 270942 GCCTCGCGCACATTGAGCAACTTACCGCGCAGCGGGAACACGCCGTACGCATCGCGACCC 271001 Query 326264 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 326323 ||| || | || | | ||||| | | || || || |||||||| || ||||| Sbjct 271002 ACCTCGCTGATGCCCGATACGGCAAGCGCCTTGGCCGAGTCACCCTCCGTGAGGATGAGC 271061 Query 326324 GTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGG 326375 ||||| |||| ||||| || ||||| ||||||| | ||| |||| Sbjct 271062 GTGCATTCGGCGCTGCGCTTCGTGCCCGCCCAATTAGCATCCTCGAGCTTGG 271113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654127942204