Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 116 8e-21 >seq3 Length=1325307 Score = 116 bits (128), Expect = 8e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAAC 334187 || || |||||||| ||||| || ||||| || || | || | |||||||| Sbjct 389850 TCCGAGCCGTCGAGGTCGTGCTCGACGTACCAGGTGCGCACCTCCTCGGGCGAGGGGAAG 389909 Query 334188 CCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGC 334247 || || | ||| || ||| |||||||||||||| || || || || | ||||| | Sbjct 389910 CCCTCGACCTGGCCATTCTGGATAGCGCGCATCAGGGTCGACTTGCCGGAACCGTTACGA 389969 Query 334248 CCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATT 334307 ||||| ||||||||||||| |||||||| ||| || | | ||||||| ||||| Sbjct 389970 CCACAGAGACCGTAGCGGTGGCCACGCTTGAGACGCAAAGTGGCAGTGTTCAGCAGAATC 390029 Query 334308 TTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || |||| || ||||| || || | ||| | |||||| ||||| || Sbjct 390030 TTGGCACCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCC 390076 Score = 89.7 bits (98), Expect = 1e-12 Identities = 236/352 (67%), Gaps = 10/352 (3%) Strand=Plus/Plus Query 298150 GAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGAT 298209 || |||||| |||| || || ||||| | || |||| ||| |||||||||||| Sbjct 270767 GAGAAAGTTGATGATCAGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCGGTCATGAT 270826 Query 298210 CATCACATGACCGTAACGAAG--CGAGGACG-TGTCTTTGTACACTTTACCGGTTTGAAG 298266 ||||| ||||| || || | ||| |||| || || || ||| || || Sbjct 270827 CATCAGGCTGCCGTAGCGCAGGCCATCAACGCTGTC---ATAGACCTTGCCGTGCTGCAG 270883 Query 298267 GCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG-GAT 298324 |||||||| | |||| | ||| |||| || |||||||| |||| || | | | || Sbjct 270884 CCCGAGAATCTCCTTGATGTGCT-TGATCTCGGCGTTCTTCATGAT-CTGGTCGTGCGAC 270941 Query 298325 GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 298384 || ||||| ||||| | | || || || || |||||||| || || |||||||| Sbjct 270942 GCCTCGCGCACATTGAGCAACTTACCGCGCAGCGGGAACACGCCGTACGCATCGCGACCC 271001 Query 298385 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 298444 ||| || | || | | ||||| | | || || || |||||||| || ||||| Sbjct 271002 ACCTCGCTGATGCCCGATACGGCAAGCGCCTTGGCCGAGTCACCCTCCGTGAGGATGAGC 271061 Query 298445 GTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGG 298496 ||||| |||| ||||| || ||||| ||||||| | ||| |||| Sbjct 271062 GTGCATTCGGCGCTGCGCTTCGTGCCCGCCCAATTAGCATCCTCGAGCTTGG 271113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879745648300