Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4 114 1e-20 seq6 109 6e-19 >seq4 Length=1186009 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 |||| ||||||||||| ||||| ||||| || ||| || || | || || |||||| Sbjct 398231 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGC 398172 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 ||||||||||| || || ||||| ||||| | || | || |||||||||| ||| || Sbjct 398171 TTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 398112 Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185 |||| | | | |||||| || || || || | ||||| || ||||| || Sbjct 398111 GCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGTC 398052 Query 42186 AGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || ||||||||||| Sbjct 398051 AGAGTCTTGACGAAGATTTGCAT 398029 >seq6 Length=598762 Score = 109 bits (120), Expect = 6e-19 Identities = 172/246 (70%), Gaps = 28/246 (11%) Strand=Plus/Plus Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050 ||||||| || | ||||||||||||||||| || |||||||| || |||||| ||| Sbjct 457100 AAACGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTACGC 457159 Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110 |||| || |||||||| || || || || || ||||||||||| | || | || |||| Sbjct 457160 CCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCC 457219 Query 42111 TTGTCCATGATTTT----TTG--------TTTGAGCGTCGC------CACCGTG-TCGCT 42151 |||||| ||| || ||| | | |||||| ||| || ||| | Sbjct 457220 TTGTCCTGGATCTTGGTCTTGACTACCTCGGTTACCGTCGCTCCACGTACCATGCTCGAT 457279 Query 42152 CGATTC--------CACA-TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGAT 42202 ||| || |||| || | |||||| |||||||| || |||||||| ||||| || Sbjct 457280 CGAGTCGCTGCTCTCACACTCCAGCGTGATCGTTTTGCCGGTCAGCGTCTTAACAAATAT 457339 Query 42203 TTGCAT 42208 ||||| Sbjct 457340 CTGCAT 457345 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||| | || | ||||||||||| || || ||||| || ||| || || | Sbjct 367056 ACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACC 366997 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || || || || || ||||| ||||| | || | | |||||| Sbjct 366996 ATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTT 366937 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 |||| ||| || |||| || | | ||||||| || ||||| || | ||||| Sbjct 366936 GTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGAT 366877 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || ||||| || |||| |||||| Sbjct 366876 CGTCTTCCCGGTAAGGGTCTTGACGAAGACTTGCAT 366841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212677777120