Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8 250 3e-61 seq3 100 3e-16 >seq8 Length=411764 Score = 250 bits (276), Expect = 3e-61 Identities = 860/1327 (65%), Gaps = 37/1327 (3%) Strand=Plus/Plus Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 ||||| || || || ||| | || || |||||| |||||||||||||||||||||| Sbjct 36126 AACTCGCCGGCCAGCACGCGGCGCATGTAAATGTTGCTCGTGTATGGCTCAAAGCACTCG 36185 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 ||| || | ||| ||| |||||||| || ||||| || ||||| || | ||| Sbjct 36186 TTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGGCGCCATCAGCAACGAGTTA 36245 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 116055 || ||||| | ||| | ||||||| | | ||||||| | | | | | | Sbjct 36246 CGCAGACCGTGCTGAGCAATCTGCGCCTTGAGCGAGGCCCAGTCCCACAGGTCCGTCGGC 36305 Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115 | | |||||| || |||| |||| ||| || || || || ||||| | ||| Sbjct 36306 GTGCGGTTCCACATGTCGTACTGCAGGAGACCCTGCGAGGCCGGGCTGCCCTCGTACGTC 36365 Query 116116 TCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 116175 || || ||||| | | |||||| || |||| ||| ||||| || || || || Sbjct 36366 TCGTACGGGCCATACTCGGCCGCCAGCTCACAGCTGCGCTCCAGGGCCGCATGGTAGATG 36425 Query 116176 GTCTCAAAAATGCGAGCATTCATT-GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA 116234 |||||||| || | |||||| | | || | || | | || |||| || | || Sbjct 36426 GTCTCAAAGATCTGCACATTCAGCAGGCGTG-CTTCTTGGCTGTCGAACG-GATAGCCCA 36483 Query 116235 CAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 116293 | || || |||| || ||||| |||||||||| ||||| ||||| || | ||| | Sbjct 36484 TGATCATGAACGCATCGGCAAGACCCTGGACACCGATACCAATGGGGCGGTGACGCATGT 36543 Query 116294 TAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 116353 | || || ||| ||||||||||||| |||| | ||||| | | || || |||| Sbjct 36544 TTGAGCGGCGCGCGCTCTCCACGGGATAGTAATTGATGTCGATGATGCGGTTCAGGTTTT 36603 Query 116354 TGGTGACAACCTTTGTGATTTCATG----------AAGCTTTTCGTAATCAAAACTGCGA 116403 || || ||||| | | || || ||| | | ||| || | | || Sbjct 36604 TGCACACCACCTTCGACACGTCGTGCAGGCGCTGGAAGTTGTACGTCTTCGAGGCGCCG- 36662 Query 116404 GTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 116463 || | ||| ||| || | || || || ||||| ||||| || ||||||| ||||| Sbjct 36663 GTGCCCTCAATGA---ACGTCGGCAGCGCAATTGATGCCAGGTTGCACACAGCCGTCTCG 36719 Query 116464 TCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAG 116523 ||| ||||||| ||||| ||||| ||||| || || ||||| || ||||||| | Sbjct 36720 TCCGGCGAGCTGTACTCGATAATCTCCGTGCACAAGTTCGAGCTCTTGATCGTGCCCAGG 36779 Query 116524 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTC 116583 ||||| || || ||| ||| || |||||||| || || | || | |||||| Sbjct 36780 TTCTTCTGGTTGCTCTTGCGGTTTGCCGAGTCCTTGTACAGGATGAAGGGGTTGCCCGTC 36839 Query 116584 TCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGC 116642 || | || | || |||||| || | ||| | | || ||| || |||| | ||||| Sbjct 36840 TCGATCTGCGCCTCGAGAATGGCGTACCACAGCTTCTGCGCCTTA-ACAGAGCGCTTGGC 36898 Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTG 116701 || ||||| |||||| || ||| || || |||||||| ||||| | ||| || | Sbjct 36899 GCGGCCCTCGCGCTCGTATTTCTCGTACAGAGCATCAAACTCCTCACC-ATAGCAGTCGG 36957 Query 116702 AGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCT 116761 || || || || | | || || | || ||||| | || || |||||| || Sbjct 36958 CCAGGCCCGGGCACTCAGCGGGGCACATCAGCGACCAGTCGCCGTTCTGCTCAACGCGGC 37017 Query 116762 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 116821 |||||| | ||| || | ||| |||||| ||| || || || || | || || | Sbjct 37018 GCATGAACAAGTCGGGAACCCACAGCGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCT 37077 Query 116822 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 116881 || || || |||| || | || || | | |||| |||||| || ||||||| Sbjct 37078 TACCATGGTTCTTGCGCAGATCAATGAACTCAAACACGTCCGAGTGCCATGGCTCCAGGT 37137 Query 116882 ACACCGCGATTGACCCCTTGCGACGA---CCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938 | | ||| | | || ||| ||| |||||| || || | ||| || || Sbjct 37138 AAATCGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGT 37197 Query 116939 TAAATACGCGAAGCATTGGAATGATACC----ATCAGATTGGCCATTTGTCCCCCGAA-- 116992 | | ||||||||||| || | ||||| ||| | || || || || || Sbjct 37198 TGTACACGCGAAGCATGGGCACAATACCGTTGCTCACA----CCGTTCGTACCGGCAATG 37253 Query 116993 TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTG 117052 |||||| | | || | || | |||||||| || |||||||| || ||| ||| Sbjct 37254 TACGAGCC--CGTCGCGCGGATGTTGTGGATGTTCAGGCCAATACCACCGGCCGTCTTGC 37311 Query 117053 AGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTG 117112 ||| || ||| | | || || | || || || || |||||||| |||| | Sbjct 37312 TGATCATCGCACACGTCTTAAGCGTGTCATAAATACCCTCAATCGAGTCGTCCTTCATGC 37371 Query 117113 CGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTG 117172 | ||||||||| ||||||||| || | || || ||||| ||||| ||||| || | Sbjct 37372 TCACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCG 37431 Query 117173 TCGCGTG 117179 |||||| Sbjct 37432 ACGCGTG 37438 Score = 116 bits (128), Expect = 5e-21 Identities = 348/523 (67%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| ||| ||| || ||||||||||| |||||||| || |||||||| |||| || Sbjct 49329 GCAAAGTCTGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCG 49270 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || || ||||| | ||| || || | || ||||| ||||| ||||| Sbjct 49269 GGCATGAGGCCACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATA 49210 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AA 127698 ||||| ||| || || || | || ||||| | || ||| | | |||| | | Sbjct 49209 CCCTCGACAGCGGCAAAAGCGACCAGGCGCTCCGAGAACGAG-GCGCGCTTGTCCGAGAT 49151 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGA-TACATGGGACGGTCTGGATCGCTTCAA 127757 ||| || ||||||| ||||||| || || ||| |||| |||| ||| || | || Sbjct 49150 CCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACA-GGGATAGTCTCGATGGCATTAA 49092 Query 127758 AGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 |||| || | | || || || ||||||| | || ||||| ||| || || Sbjct 49091 AGAGGAACTCGCGCTGCT-CCGGCTCGCGGATGTACGTGTCGATGAGGAGTGAGTACGTC 49033 Query 127817 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 127875 || ||||| | | ||| || ||| | |||||||| |||| || ||| Sbjct 49032 TCCGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAACAGCGGGCCTCGGCCGC 48974 Query 127876 CTGTACCTCATCGGCAAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAG 127934 ||| ||||| | || || | | | | ||||| |||||| ||||| || ||| Sbjct 48973 CTGCACCTCGGC-GCTGAAGCGCTCTACCAGGTTCTCGTTAACAATGCCATCCGATGCAG 48915 Query 127935 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 127991 |||| || ||||||| | | | || | | || || ||||||| || | || Sbjct 48914 CAAAGAAGGCCAGGACGTGGCTAACAAAGTGGCGCTCGTTGTCGTTCATGCGGTGGTCCC 48855 Query 127992 AGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||||| || ||||| || || || | |||||| |||||||| Sbjct 48854 AGTCGTGCAGGTCCTTCGACAGGTCCATCTCCTCGGCAGTCCA 48812 >seq3 Length=1325307 Score = 100 bits (110), Expect = 3e-16 Identities = 253/381 (66%), Gaps = 14/381 (4%) Strand=Plus/Plus Query 176596 CTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 176655 |||||| || || || | |||| || || | |||| ||| || ||||| ||||| || Sbjct 270740 CTTGAGCAGCGACGGGTAAAAGTGGTCGAGAAAGTTGATGATCAGGCCCTTGATGTGCGA 270799 Query 176656 ACCATCGTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATC 176715 ||||| ||| || ||||| ||||| || | || ||||| || | ||| Sbjct 270800 GCCATCAAAGTCCTGGTCGGTCATGATCATCAGGCTGCCGTAGCGCAGGCCATCAACGCT 270859 Query 176716 TTGATAATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTT 176775 | ||| |||| || || || || || | ||||| ||||| | |||| ||| ||| Sbjct 270860 GTCATAGACCTTGCCGTGCTGCAGCCCGAGAATCTCCTTGATGTGCTTGATCTCGGCGTT 270919 Query 176776 -----TGATGTGAGTTGCGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGA 176830 |||| || || | || || || ||||| ||||| |||| ||||| || Sbjct 270920 CTTCATGATCTG-GTCGTGCGAC----GCCTCGCGCACATTGAGCAACTTACCGCGCAGC 270974 Query 176831 GGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTC 176890 |||||||| ||||| ||| ||||| ||| | || || | || || || | ||| Sbjct 270975 GGGAACACGCCGTACGCATCGCGACCCACCTCGCTGATGCCCGATACGGCAAGCGCCTTG 271034 Query 176891 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGC--CGTCCCCGCCT 176948 || || ||||||||||| | ||||||||| || ||| || || ||| |||||| Sbjct 271035 GCCGAGTCACCCTCCGTGAGGATGAGCGTGCA--TTCGGCGCTGCGCTTCGTGCCCGCCC 271092 Query 176949 TGTTCGCATCGTCCAACTTGG 176969 || ||||| || | ||||| Sbjct 271093 AATTAGCATCCTCGAGCTTGG 271113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507061960880