Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq6 154 2e-32 seq4 122 1e-22 >seq6 Length=598762 Score = 154 bits (170), Expect = 2e-32 Identities = 181/246 (74%), Gaps = 28/246 (11%) Strand=Plus/Plus Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435 ||||||| || || |||||||| |||||||| ||||||||||||||| ||||| ||| Sbjct 457100 AAACGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTACGC 457159 Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495 |||| || ||||||||||| || || |||| |||||||||||| | ||| | || |||| Sbjct 457160 CCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCC 457219 Query 46496 TTGTCCATGATCTTCTTCTTG------------AGCGTCGC------CACCGTG-TCGCT 46536 |||||| |||||| ||||| | |||||| ||| || ||| | Sbjct 457220 TTGTCCTGGATCTTGGTCTTGACTACCTCGGTTACCGTCGCTCCACGTACCATGCTCGAT 457279 Query 46537 CGATTC--------CACA-TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGAT 46587 ||| || |||| |||| |||||| |||||||| |||||||| |||||||| || Sbjct 457280 CGAGTCGCTGCTCTCACACTCCAGCGTGATCGTTTTGCCGGTCAGCGTCTTAACAAATAT 457339 Query 46588 TTGCAT 46593 ||||| Sbjct 457340 CTGCAT 457345 Score = 129 bits (142), Expect = 7e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | || |||||||| ||||| ||||||||| || ||||| | Sbjct 367056 ACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACC 366997 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||||||||| || |||| |||||| ||||| | || | | |||||| Sbjct 366996 ATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTT 366937 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| || | | ||||||| || ||||| || | ||||| Sbjct 366936 GTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGAT 366877 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || || |||| |||||| Sbjct 366876 CGTCTTCCCGGTAAGGGTCTTGACGAAGACTTGCAT 366841 >seq4 Length=1186009 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||||| || || ||||||||| || ||||| | || || Sbjct 398238 CACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTC 398179 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||| || ||||| |||| ||||| ||||| | || | || |||||||||| Sbjct 398178 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 398119 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| | | | |||||| || || || || | ||||| || || Sbjct 398118 GATCTTGGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTT 398059 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || ||||||||||| Sbjct 398058 GCCAGTCAGAGTCTTGACGAAGATTTGCAT 398029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238272821360