Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8 432 4e-116 seq6 120 3e-22 seq4 116 4e-21 >seq8 Length=411764 Score = 432 bits (478), Expect = 4e-116 Identities = 595/823 (72%), Gaps = 17/823 (2%) Strand=Plus/Minus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||||||||| || | || |||| | |||||| | |||||| || |||||||| || Sbjct 49600 CTCAAAAAAGTTTGACTTGCCCTGGAGCGAAATGTTCTCCATAAAGTCAAAGGGGTTCGC 49541 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | |||||||||||||| |||||| ||| ||| ||||| | ||| ||||| ||||| Sbjct 49540 CGAGTTGTAGTGCTTGGAGTTGCCGA---GGTTGACAAGCAGGCGGTCCGCCACAAACTC 49484 Query 132744 GATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGT 132803 ||||| || ||||| | || | || | ||| || ||||| || ||||| Sbjct 49483 AATGTACTGGCACATGAGGCGGGCGTTCATGCCGATCAGCGAGACAGGCAGGGCGTCGGT 49424 Query 132804 GAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT 132863 | |||| ||||| || || || || || |||| || | || || | || | | Sbjct 49423 CAAAAAGTCCTGCTCAATAGCCACGGCCTCAGTGATAATGCGGTTCAC-CGTGTCGGGGT 49365 Query 132864 CGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGT 132922 || || | | || || |||||| | ||| |||||||| |||| |||||||| Sbjct 49364 GCGCGCGCTTCTTCAGGTGGCTGAACAAGAGGCACGCAAAGTCTGTGTGCAGGCCCTCGT 49305 Query 132923 CCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCC 132982 | | || ||||| ||||| ||| | || ||||||||||||||| ||||| ||||||| Sbjct 49304 CACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCACGTTTCTTGAGCC 49245 Query 132983 AAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCA 133042 |||| |||| |||||| |||||| || |||| |||||||| || || ||||| |||| Sbjct 49244 AAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCCTCGACAGCGGCAAAAGCGACCA 49185 Query 133043 GGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTT 133102 ||||||| ||||| ||| ||| | |||||||||||| ||||| |||||||||| Sbjct 49184 GGCGCTCCGAGAACGAGGCGCGCTTGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTTT 49125 Query 133103 CTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCT--TCCGAGGA 133160 |||||| || || || |||||||| || | | | | | | | || |||| Sbjct 49124 GCTTGACGACAGGGATAGTCTCGATGGCATT--AAAGAGGAACTCGCGCTGCTCCGGCTC 49067 Query 133161 ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220 || | ||| |||||||||||| || ||| | |||||||| | ||||||||| || Sbjct 49066 GCGGATGTACGTGTCGATGAGGAGTGAGTACGTCTCCGAGTGGATGTTCTCCATCATAAT 49007 Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGA 133279 || |||||||| || || || |||||| || ||||||| || | || ||| ||||| | Sbjct 49006 CTGGAAGCCGTAGAAACAGCGGGCCTCGGCCGCCTGCACCTC-GGCGCTGAAGCGCTCTA 48948 Query 133280 CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGA 133339 |||| || ||||| || ||||| || || || || |||||||| ||||| | | | Sbjct 48947 CCAGGTTCTCGTTAACAATGCCATCCGATGCAGCAAAGAAGGCCAGGACGTGGCTAACAA 48888 Query 133340 AATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCA 133396 | ||||||||||||||||||| || | ||||||||| || |||||| |||||||||| Sbjct 48887 AGTGGCGCTCGTTGTCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCCTTCGACAGGTCCA 48828 Query 133397 CCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| | ||||| |||||||||||||| || |||||||| Sbjct 48827 TCTCCTCGGCAGTCCAGAACGACGCCTCGGCCTTCTTGTACAT 48785 >seq6 Length=598762 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || || || || || |||||| | || || ||| | || Sbjct 366841 ATGCAAGTCTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 366900 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || ||| | |||||| Sbjct 366901 GACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 366960 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| |||||||| || | |||||||| | |||||||||| Sbjct 366961 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 367020 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||||||| || | || || Sbjct 367021 ATCCAGAAGGAGAGC-ACTCTCCACCTTGTGCTGCGTCTGCGTGGTGG 367067 >seq4 Length=1186009 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || |||||| | || |||||| | | Sbjct 398029 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACCCTTGAGGTCGAGTCTTCG 398088 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 398089 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 398148 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || || | |||||||| | |||||||||| Sbjct 398149 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 398208 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| ||| || ||||| | ||||| || Sbjct 398209 ATTCAGAAGGAGAGC-ACCCTGCACCTCGTGCTTCG 398243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172687461120