Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 145 2e-29 seq8 91.5 4e-13 seq1 91.5 4e-13 >seq3 Length=1325307 Score = 145 bits (160), Expect = 2e-29 Identities = 266/387 (69%), Gaps = 2/387 (1%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 ||||| || || || ||||| | | ||| ||| | ||||| | || | |||||| Sbjct 1312549 TCAATACCATCTTCACCGTACGCAAACTCAATTACGTTGTTGGTAGAGTTGCGTACGGTA 1312490 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 ||||| | ||| | | ||| |||| ||| | ||||||||||||||| |||||| Sbjct 1312489 CCGTCATAGCAAATAGTTACGTCCTCCAGGGCCTTCACTAAACGACGCTGAATGTAACCA 1312430 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 ||| | ||||| |||||||| ||||| ||||| |||||||| |||| || |||||| Sbjct 1312429 GTTTCGGCCGTTTTCACAGCTGTGTCAATCAGACCCTCACGACCAGCCATGGCGTGGAAG 1312370 Query 302671 AATAGCTCTTCCG-GTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC 302729 || | || | || | | ||| | ||| | | || ||||||| || ||||| || Sbjct 1312369 AAGAATTCGTGCGCGGTGAGGCCTCGCAA-ATACGAATTCTCAACAAAGCCACGGCTTTC 1312311 Query 302730 GGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789 |||| | |||| |||||| || || ||||| ||| || |||| | ||||| Sbjct 1312310 AGGCGTAAAGTCGTCCTTGGTGAAATGCGGCAGACTCCGGTGACGGAAGCCAAAAGGGAT 1312251 Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATC 302849 |||||| || || || |||||| || | || | | ||| || |||||||| | Sbjct 1312250 ACGCTTGCCTTCCACCGACTGCTGACCGACACAAGCAGACATTTGTGAAATATTGATGAA 1312191 Query 302850 ACTGCCCTTGGAGCCAGCATTTACCAT 302876 | ||||| || |||||| ||||||| Sbjct 1312190 AGAACCCTTCGAACCAGCAATTACCAT 1312164 >seq8 Length=411764 Score = 91.5 bits (100), Expect = 4e-13 Identities = 209/311 (67%), Gaps = 8/311 (3%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCA 155645 |||| || ||||| || || || || ||||| | | || |||||| || | |||||| Sbjct 36688 CAATTGATGCCAGGTTGCACACAGCCGTCTCGTCCGGCGA-GCTGTACTCGATAATCTCC 36746 Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705 ||||| ||| || |||||||| ||||| | ||||||||||| || | ||| Sbjct 36747 GTGCACAAGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTTGCC 36806 Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGC 155765 | |||||||| || ||| | ||| | || ||||| ||||| || || ||||| | Sbjct 36807 GAGTCCTTGTACAGGATGAAGGGGTTGCCCGTCTCGATCTGCGCCTCGAGAATGGCGTAC 36866 Query 155766 CAGAGGTCACGGGCATTAA---TTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATA 155822 || || | | || |||| ||||| | | ||| || ||| |||||| Sbjct 36867 CACAGCTTCTGCGCCTTAACAGAGCGCTTGGCG---CGGCCCTCGCGCTCGTATTTCTCG 36923 Query 155823 TACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAA 155882 ||||| | | |||||||| || || || ||| || ||||||| | ||||||| Sbjct 36924 TACAGAGCATCAAACTCCTCACCATAGCAGTCGGCCAGGCCCGGGCACTCAGCGGGGCAC 36983 Query 155883 AACAGCGACCA 155893 | ||||||||| Sbjct 36984 ATCAGCGACCA 36994 >seq1 Length=1477453 Score = 91.5 bits (100), Expect = 4e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 251487 ACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGC 251546 ||| || ||||||||||| || |||||||| ||||||||||| |||||||| || || Sbjct 762492 ACCATGCGAAATCATACAGTCGCGCTCCATCTCACCGAAACGCAGACCACCGTCACGGCT 762551 Query 251547 CCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTG 251606 | |||||| | ||||| || ||||| | || ||||||| | ||| || || Sbjct 762552 ACGACCCTCAACCGGCTGCCGCGTGAGGATCTGCACAGGACCGCGCGCGCGACTGTGGAT 762611 Query 251607 CTTATCATTTACCATATGCTTGAGACGCTGGTA 251639 ||| || | ||||| || || || |||||||| Sbjct 762612 CTTGTCGTCCACCATGTGTTTTAGGCGCTGGTA 762644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817260562066