Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 279 6e-70 seq3 86.0 8e-12 >seq8 Length=411764 Score = 279 bits (308), Expect = 6e-70 Identities = 955/1470 (65%), Gaps = 43/1470 (3%) Strand=Plus/Plus Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763 || ||| ||||| | |||||||| |||||||| || || || | ||| || || Sbjct 36149 CATGTAAATGTTGCTCGTGTATGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGGCTCGT 36208 Query 110764 GGAGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG 110821 |||||| || ||||| || ||||||| || || |||||| ||||| | || || Sbjct 36209 GGAGGCCGTCGGCATCGGCGCCATCAGCAACGA--GTTACGCAGACCGTGCTGAGCAATC 36266 Query 110822 CGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881 | ||||||| ||||||| | | | | | | | ||||||||| || Sbjct 36267 TGCGCCTTGAGCGAGGCCCAGTCCCACAGGTCCGTCGGCGTGCGGTTCCACATGTCGTAC 36326 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 || || | || || || || || ||||| | || || || | || | | | Sbjct 36327 TGCAGGAGACCCTGCGAGGCCGGGCTGCCCTCGTACGTCTCGTACGGGCCATACTCGGCC 36386 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 |||| |||||||| |||||||| || || || ||||| |||||||| | ||||| Sbjct 36387 GCCAGCTCACAGCTGCGCTCCAGGGCCGCATGGTAGATGGTCTCAAAGATCTGCACATTC 36446 Query 111002 ATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059 | | ||||| | ||| || || | |||| | || || |||| || | Sbjct 36447 AGCAGGCGTGCTTCTTGGCTG--TCGAACGGATAGCCCATGATCATGAACGCATCGGCAA 36504 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAA 111119 |||| || ||||| | |||||| || | ||| ||||| || || ||||| |||| | Sbjct 36505 GACCCTGGACACCGATACCAATGGGGCGGTGACGCATGTTTGAGCGGCGCGCGCTCTCCA 36564 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 ||||||| |||| |||| |||| ||||| || |||||| || | ||| | | | Sbjct 36565 CGGGATAGTAATTGATGTCGATGATGCGGTTCAGGTTTTTGCACACCACCTTCGACACGT 36624 Query 111180 CATG----------AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 111229 | || ||||| | | | || | | || || | ||| ||| || | Sbjct 36625 CGTGCAGGCGCTGGAAGTTGTACGTCTTCGAG-GCGCCGGTGCCCTCAATGA---ACGTC 36680 Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || || |||||||||| ||||| ||||||||||| ||| ||||||| | | Sbjct 36681 GGCAGCGCAATTGATGCCAGGTTGCACACAGCCGTCTCGTCCGGCGAGCTGTACTCGATA 36740 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || ||||| || ||||| ||||| |||| ||||| ||||| ||||| | Sbjct 36741 ATCTCCGTGCACAAGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGG 36800 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || |||||||| || ||| |||| | |||||||| |||| | | |||||| Sbjct 36801 TTTGCCGAGTCCTTGTACAGGATGAAGGGGTTGCCCGTCTCGATCTGCGCCTCGAGAATG 36860 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACT 111467 || | ||| | | || ||| || || | ||| ||||| || ||||| |||||| | Sbjct 36861 GCGTACCACAGCTTCTGCGCCT--TAACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTATT 36918 Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCT 111526 | ||| || || |||||||||||| ||| || ||||| || || || || | Sbjct 36919 TCTCGTACAGAGCATCAAACTCCTCA-CCATAGCAGTCGGCCAGGCCCGGGCACTCAGCG 36977 Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 || || | || ||||| | || | |||||| || |||||| | ||| |||| | Sbjct 36978 GGGCACATCAGCGACCAGTCGCCGTTCTGCTCAACGCGGCGCATGAACAAGTCGGGAACC 37037 Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 111646 ||||| | || || || | || |||| || | ||| ||||| || | Sbjct 37038 CACAGCGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCATGGTTCTTGCGCAGA 37097 Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC---- 111702 |||| |||||| | | |||| |||||||||||| || || | || | | || Sbjct 37098 TCAATGAACTCAAACACGTCCGAGTGCCATGGCTCCAGGTAAATCGCAAAGGCGCCGGGG 37157 Query 111703 CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762 | | | | ||| | || | || |||||||||||| ||| | ||||||||||| || Sbjct 37158 CGCTTGTTG-CCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTACACGCGAAGCATGGG 37216 Query 111763 AATAATACCATCTGAT-TGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCAC 111819 | |||||| | || | ||| || || || || |||||| | || | | Sbjct 37217 CACAATACCGT-TGCTCACACCGTTCGTACCGGCAATGTACGAG--CCCGTCGCGCGGAT 37273 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 | ||||||| || |||||||| || ||| ||| ||| ||||||| | |||| Sbjct 37274 GTTGTGGATGTTCAGGCCAATACCACCGGCCGTCTTGCTGATCATCGCACACGTCTTAAG 37333 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 || |||| ||||| | || ||||| ||||| || | ||||||||| ||||| Sbjct 37334 CGTGTCATAAATACCCTCAATCGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACAT 37393 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA--CATACCT 111997 || || | || || ||||||||||| ||||| || | ||||| | || | | | Sbjct 37394 TTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTGCGTAAAGGCCTTC-- 37451 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | |||||| || ||| ||||| | | | | || || ||||||||||| || Sbjct 37452 TCGGACATGAAGTTGTACGTCTCGATCGCGCTCTTCACATCCTCGCCGTGGATGCCCATA 37511 Query 112058 GCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA 112117 ||||| ||||| | ||||| ||| ||| ||| || |||| | || |||| | || Sbjct 37512 GCGACACGCATAAGCATGTGCTGGGGGCGCTCCGCGACCTTGCCGTTGATCCGTAGCAGG 37571 Query 112118 TAGCTCTTCTCAAGGGTTTTGAGACCAAAG 112147 ||| ||| || || |||| |||||| Sbjct 37572 TAGGAACGCTCCAGCGTCTTGAAGCCAAAG 37601 Score = 86.0 bits (94), Expect = 8e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| || ||||| || || || || || || || ||||| | || || Sbjct 49329 GCAAAGTCTGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCG 49270 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 |||||||| || || ||||| | |||| | || | | ||| || || ||||| |||||| Sbjct 49269 GGCATGAGGCCACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATA 49210 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 ||||| ||| ||||| || | ||||| || | ||| ||| Sbjct 49209 CCCTCGACAGCGGCAAAAGCGACCAGGCGCTCCGAGAACGAG 49168 >seq3 Length=1325307 Score = 86.0 bits (94), Expect = 8e-12 Identities = 194/290 (67%), Gaps = 4/290 (1%) Strand=Plus/Plus Query 182513 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 182572 ||| || ||||||||||| || |||||| || || ||||| ||||| || | || Sbjct 270779 GATCAGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCGGTCATGATCATCAGGCTGCC 270838 Query 182573 ATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTT 182632 ||||| || || ||| | ||| | || || || || || || || |||| ||| Sbjct 270839 GTAGCGCAGGCCATCAACGCTGTCATAGACCTTGCCGTGCTGCAGCCCGAGAATCTCCTT 270898 Query 182633 GAGATCATTGAACTCCTGGTT--TGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTC 182690 || | |||| ||| ||| | ||| | ||| | ||| || || || ||||| Sbjct 270899 GATGTGCTTGATCTCGGCGTTCTTCATG--ATCTGGTCGTGCGACGCCTCGCGCACATTG 270956 Query 182691 TTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCC 182750 | |||||||| || |||||||| ||||| ||| ||||| || | || ||| Sbjct 270957 AGCAACTTACCGCGCAGCGGGAACACGCCGTACGCATCGCGACCCACCTCGCTGATGCCC 271016 Query 182751 GCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACA 182800 | || || || | || ||||| ||||||||||||| ||||| || || Sbjct 271017 GATACGGCAAGCGCCTTGGCCGAGTCACCCTCCGTGAGGATGAGCGTGCA 271066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031858692800