Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 266 4e-66 seq3 89.7 6e-13 >seq8 Length=411764 Score = 266 bits (294), Expect = 4e-66 Identities = 923/1426 (65%), Gaps = 37/1426 (3%) Strand=Plus/Plus Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 ||||| || || || ||| | || || || ||| |||||||||||||||||||||| Sbjct 36126 AACTCGCCGGCCAGCACGCGGCGCATGTAAATGTTGCTCGTGTATGGCTCAAAGCACTCG 36185 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 ||| || | ||| ||| |||||||| || ||||| || ||||| || | |||| Sbjct 36186 TTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGGCGCCATCAGCAACGAGTTA 36245 Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTC 118334 || ||||| | | ||| | ||||||| | | ||||||| | | | | | | Sbjct 36246 CGCAGACCGTGCTGAGCAATCTGCGCCTTGAGCGAGGCCCAGTCCCACAGGTCCGTCGGC 36305 Query 118335 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 118394 | | |||||| || |||| |||| ||| || || || || ||||| | ||| Sbjct 36306 GTGCGGTTCCACATGTCGTACTGCAGGAGACCCTGCGAGGCCGGGCTGCCCTCGTACGTC 36365 Query 118395 TCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 118454 || || ||||| | | |||||| || |||| ||| ||||| || || || || Sbjct 36366 TCGTACGGGCCATACTCGGCCGCCAGCTCACAGCTGCGCTCCAGGGCCGCATGGTAGATG 36425 Query 118455 GTTTCAAAAATGCGAGCATTCATT-GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 118513 || ||||| || | |||||| | | || | || | | || |||| || || Sbjct 36426 GTCTCAAAGATCTGCACATTCAGCAGGCGTG-CTTCTTGGCTGTCGAACG-GATAGCCCA 36483 Query 118514 CAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 118572 | || || |||| || ||||| |||||||||| ||||| ||||| || | ||| | Sbjct 36484 TGATCATGAACGCATCGGCAAGACCCTGGACACCGATACCAATGGGGCGGTGACGCATGT 36543 Query 118573 TAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 118632 | || || ||| ||||||||||||| |||| | ||||| | | || || |||| Sbjct 36544 TTGAGCGGCGCGCGCTCTCCACGGGATAGTAATTGATGTCGATGATGCGGTTCAGGTTTT 36603 Query 118633 TGGTGACAACCTTTGTGATTTCATG----------AAGCTTTTCGTAATCAAAACTGCGA 118682 || || ||||| | | || || ||| | | ||| || | | || Sbjct 36604 TGCACACCACCTTCGACACGTCGTGCAGGCGCTGGAAGTTGTACGTCTTCGAGGCGCCG- 36662 Query 118683 GTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 118742 || | ||| ||| || | || || || ||||| ||||| || ||||||| ||||| Sbjct 36663 GTGCCCTCAATGA---ACGTCGGCAGCGCAATTGATGCCAGGTTGCACACAGCCGTCTCG 36719 Query 118743 TCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAG 118802 ||| ||||||| ||||| |||||||||||||| || ||||| || ||||||| | Sbjct 36720 TCCGGCGAGCTGTACTCGATAATCTCCGTGCACAAGTTCGAGCTCTTGATCGTGCCCAGG 36779 Query 118803 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTC 118862 ||||| || || ||| ||| || |||||||| || ||| | || | |||||| Sbjct 36780 TTCTTCTGGTTGCTCTTGCGGTTTGCCGAGTCCTTGTACAGGATGAAGGGGTTGCCCGTC 36839 Query 118863 TCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGC 118921 || | || | || |||||| || | ||| | | || || || |||| | ||||| Sbjct 36840 TCGATCTGCGCCTCGAGAATGGCGTACCACAGCTTCTGC-GCCTTAACAGAGCGCTTGGC 36898 Query 118922 TCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGA 118981 || ||||| |||||| || ||| || || |||||||| ||||| | || | Sbjct 36899 GCGGCCCTCGCGCTCGTATTTCTCGTACAGAGCATCAAACTCCTCACCATAGCAGTCGGC 36958 Query 118982 GAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 119041 || || || || | | ||||| | || ||||| | || || |||||| || Sbjct 36959 CAGGCCCGGGCACTCAGCGGGGCACATCAGCGACCAGTCGCCGTTCTGCTCAACGCGGCG 37018 Query 119042 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 119101 |||||| | ||| || | ||| |||||| ||| || || || || | || || | Sbjct 37019 CATGAACAAGTCGGGAACCCACAGCGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTT 37078 Query 119102 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 119161 || || || |||| || | || || | | |||| |||||| || |||||||| Sbjct 37079 ACCATGGTTCTTGCGCAGATCAATGAACTCAAACACGTCCGAGTGCCATGGCTCCAGGTA 37138 Query 119162 CACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGC 119215 | ||| | | || ||| | | ||| |||||| || || | ||| ||| Sbjct 37139 AATCGCAAAGGCGCCGGGGCGCTT--GTTG-CCACCCTGGTCCACGTAGCGCGCTGTGTT 37195 Query 119216 GTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TA 119273 ||| | || |||||||| || | ||||| | | || || || || || || Sbjct 37196 GTTGTACACGCGAAGCATGGGCACAATACCGTTGCTCACACCGTTCGTACCGGCAATGTA 37255 Query 119274 CGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 119333 |||| | | || | || | |||||||| || |||||||| || ||| ||| | Sbjct 37256 CGAGCC--CGTCGCGCGGATGTTGTGGATGTTCAGGCCAATACCACCGGCCGTCTTGCTG 37313 Query 119334 ATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCG 119393 || ||| ||| | | || || | || || || || |||||||| |||| | Sbjct 37314 ATCATCGCACACGTCTTAAGCGTGTCATAAATACCCTCAATCGAGTCGTCCTTCATGCTC 37373 Query 119394 ATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTC 119453 | ||||||||| ||||||||| || |||| || ||||| ||||| || || || | | Sbjct 37374 ACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGAC 37433 Query 119454 GCGTGGATGAA--CATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGT 119511 ||||| | || | | | | |||||| || ||| ||||| | || | | Sbjct 37434 GCGTGCGTAAAGGCCTTC--TCGGACATGAAGTTGTACGTCTCGATCGCGCTCTTCACAT 37491 Query 119512 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 | || ||||| || || || | ||| ||||||| ||||| ||||| Sbjct 37492 CCTCGCCGTGGATGCCCATAGCGACACGCATAAGCATGTGCTGGGG 37537 Score = 113 bits (124), Expect = 6e-20 Identities = 347/523 (66%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| || ||||||||||| |||||||| || |||||||| |||| || Sbjct 49329 GCAAAGTCTGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCG 49270 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||||||| || || ||||| | ||| || || | || ||||| ||||| ||||| Sbjct 49269 GGCATGAGGCCACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATA 49210 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AA 130194 ||||| ||| || || || | || ||||| | || ||| | | |||| | | Sbjct 49209 CCCTCGACAGCGGCAAAAGCGACCAGGCGCTCCGAGAACGAG-GCGCGCTTGTCCGAGAT 49151 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGA-TACACGGGACGGTCTGGATCGCTTCAA 130253 ||| || ||||||| ||||||| || || ||| |||| |||| ||| || | || Sbjct 49150 CCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACA-GGGATAGTCTCGATGGCATTAA 49092 Query 130254 AGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312 |||| || | | || || || ||||||| | || ||||| ||| || || Sbjct 49091 AGAGGAACTCGCGCTGCT-CCGGCTCGCGGATGTACGTGTCGATGAGGAGTGAGTACGTC 49033 Query 130313 TCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 130371 || |||| | | ||| || ||| | |||||||| |||| || ||| Sbjct 49032 TCCGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAACAGCGGGCCTCGGCCGC 48974 Query 130372 CTGTACCTCATCTGCAAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAG 130430 ||| ||||| | || || | | | | ||||| |||||| ||||| || ||| Sbjct 48973 CTGCACCTCGGC-GCTGAAGCGCTCTACCAGGTTCTCGTTAACAATGCCATCCGATGCAG 48915 Query 130431 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 130487 |||| || ||||||| | | | || | | || || ||||||| || | || Sbjct 48914 CAAAGAAGGCCAGGACGTGGCTAACAAAGTGGCGCTCGTTGTCGTTCATGCGGTGGTCCC 48855 Query 130488 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| || |||||||| || || | |||||| |||||||| Sbjct 48854 AGTCGTGCAGGTCCTTCGACAGGTCCATCTCCTCGGCAGTCCA 48812 >seq3 Length=1325307 Score = 89.7 bits (98), Expect = 6e-13 Identities = 220/332 (66%), Gaps = 10/332 (3%) Strand=Plus/Plus Query 179733 CTTGAGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 179792 |||||| ||||| || | |||| || || | |||| ||| || ||||| ||||| || Sbjct 270740 CTTGAGCAGCGACGGGTAAAAGTGGTCGAGAAAGTTGATGATCAGGCCCTTGATGTGCGA 270799 Query 179793 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATC 179852 ||||| ||| || ||||| ||||| || | || ||||| || | ||| Sbjct 270800 GCCATCAAAGTCCTGGTCGGTCATGATCATCAGGCTGCCGTAGCGCAGGCCATCAACGCT 270859 Query 179853 TTGATAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT 179912 | ||| |||| || || || || || | |||| ||||| | |||| ||| ||| Sbjct 270860 GTCATAGACCTTGCCGTGCTGCAGCCCGAGAATCTCCTTGATGTGCTTGATCTCGGCGTT 270919 Query 179913 -----TGATGTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGA 179967 |||| || || | || || || || || ||||| |||| || || || Sbjct 270920 CTTCATGATCTG-GTCGTGCGAC----GCCTCGCGCACATTGAGCAACTTACCGCGCAGC 270974 Query 179968 GGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTC 180027 |||||||| ||||| ||| ||||| ||| | || || | || || || | ||| Sbjct 270975 GGGAACACGCCGTACGCATCGCGACCCACCTCGCTGATGCCCGATACGGCAAGCGCCTTG 271034 Query 180028 GCGGAATCACCCTCCGTCACGATGAGCGTACA 180059 || || ||||||||||| | ||||||||| || Sbjct 271035 GCCGAGTCACCCTCCGTGAGGATGAGCGTGCA 271066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435060852080