Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 221 1e-52 seq3 91.5 2e-13 >seq8 Length=411764 Score = 221 bits (244), Expect = 1e-52 Identities = 842/1298 (65%), Gaps = 33/1298 (3%) Strand=Plus/Minus Query 104321 CACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTC 104380 ||||| | || ||||| ||||||||||| || || | ||||||||||| |||||| Sbjct 37438 CACGCGTCGCCGACCCTGTTCAATGCTGGCACGCCCAACCCCCAAATGTCGTCCTGCTTC 37379 Query 104381 CTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCG 104440 ||| | || ||||| ||||| || | ||||| |||| || |||| | ||||||| Sbjct 37378 CTTGTGAGCATGAAGGACGACTCGATTGAGGGTATTTATGACACGCTTAAGACGTGTGCG 37319 Query 104441 CAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAA 104500 ||| ||| ||| || |||||||| || ||||||| | | | || | Sbjct 37318 ATGATCAGCAAGACGGCCGGTGGTATTGGCCTGAACATCCACAACATCCGCGCGACGGG- 37260 Query 104501 TCTCGTA--TTCGGGGGACAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTA 104557 |||||| || || || || ||| | || | |||||| | || ||||||||||| Sbjct 37259 -CTCGTACATTGCCGGTACGAACGGTGTGAGCA-ACGGTATTGTGCCCATGCTTCGCGTG 37202 Query 104558 TTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGC 104613 | ||| |||||||||||| || | || | ||| | | | | || | | || Sbjct 37201 TACAACAACACAGCGCGCTACGTGGACCAGGGTGG-CAACAAGCGCCCCGGCGCCTTTGC 37143 Query 104614 AGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCA 104673 | || || |||||||||||| |||| | | |||||| |||| |||| ||||| Sbjct 37142 GATTTACCTGGAGCCATGGCACTCGGACGTGTTTGAGTTCATTGATCTGCGCAAGAACCA 37083 Query 104674 AGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCT 104732 ||| | ||||||| || |||| ||||| || ||| || || ||| |||| || | | Sbjct 37082 TGGTAAGGAGGAGGTGC-GTGCGCGCGACCTGTTCCTGGCGCTGTGGGTTCCCGACTTGT 37024 Query 104733 TCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTG 104792 ||||| | |||||| ||| ||| | ||||| || | || || | || || | Sbjct 37023 TCATGCGCCGCGTTGAGCAGAACGGCGACTGGTCGCTGATGTGCCCCGCTGAGTGCCCGG 36964 Query 104793 GTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAA 104851 | || |||| ||| | |||||||||||||| || || ||| || |||||| || Sbjct 36963 GCCTGGCCGACTGCTAT-GGTGAGGAGTTTGATGCTCTGTACGAGAAATACGAGCGCGAG 36905 Query 104852 GGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTC 104909 || || || | ||| | || || || || | ||||| | || |||||| || | | Sbjct 36904 GGCCGCGCCA-AGCGCTCTGT-TAAGGCGCAGAAGCTGTGGTACGCCATTCTCGAGGCGC 36847 Query 104910 AAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATC 104969 | | |||||| || | || | ||| || ||||| ||| | |||| ||||| || | Sbjct 36846 AGATCGAGACGGGCAACCCCTTCATCCTGTACAAGGACTCGGCAAACCGCAAGAGCAACC 36787 Query 104970 AAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG 105029 | ||||| |||| ||||||||| || || | || || || || | || ||||| Sbjct 36786 AGAAGAACCTGGGCACGATCAAGAGCTCGAACTTGTGCACGGAGATTATCGA--GTACAG 36729 Query 105030 --ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--AT--G 105083 || |||||||||||||| ||||| |||||||| || || || | || || Sbjct 36728 CTCGCCGGACGAGACGGCTGTGTGCAACCTGGCATCAATTGCGCTGCCGACGTTCATTGA 36669 Query 105084 TGGATCCAGAG--ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGT 105141 || || | | | ||||| | | | | || ||||| || |||| || Sbjct 36668 GGGCACCGGCGCCTCGAAGACGTACAACTTCCAGCGCCTGCACGACGTGTCGAAGGTGGT 36609 Query 105142 CACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAA 105201 ||||||||| ||| | | || || | |||| || ||||| |||| || || Sbjct 36608 GTGCAAAAACCTGAACCGCATCATCGACATCAATTACTATCCCGTGGAGAGCGCGCGCCG 36549 Query 105202 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT 105261 || || ||| | ||||| || |||||| ||||||| |||||||| || |||| ||||| Sbjct 36548 CTCAAACATGCGTCACCGCCCCATTGGTATCGGTGTCCAGGGTCTTGCCGATGCGTTCAT 36489 Query 105262 --TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 || | | || | | || || | | ||||| | |||| || || ||| Sbjct 36488 GATCATGG--GCTATCCGTTCGACAGCCAAGAAGCACGCCTGCTGAATGTGCAGATCTTT 36431 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCA 105379 |||||||| || || || || || ||| || | ||| |||| | | |||| || Sbjct 36430 GAGACCATCTACCATGCGGCCCTGGAGCGCAGCTGTGAGCTGGCGGCCGAGTATGGCCCG 36371 Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 105439 || || || | ||||| || || || || || | || || | || |||||| | Sbjct 36370 TACGAGACGTACGAGGGCAGCCCGGCCTCGCAGGGTCTCCTGCAGTACGACATGTGGAAC 36311 Query 105440 GGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGT 105499 | | | | | | | ||||||| | ||||||| | || || | ||| Sbjct 36310 CGCACGCCGACGGACCTGTGGGACTGGGCCTCGCTCAAGGCGCAGATTGCTCAGCACGGT 36251 Query 105500 CTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 105559 || |||||| | || ||||| || ||||| || |||||||| || ||| | || Sbjct 36250 CTGCGTAACTCGTTGCTGATGGCGCCGATGCCGACGGCCTCCACGAGCCAGATCCTCGGC 36191 Query 105560 AATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 || || |||||||| || ||||||| ||||| || Sbjct 36190 TTCAACGAGTGCTTTGAGCCATACACGAGCAACATTTA 36153 Score = 123 bits (136), Expect = 3e-23 Identities = 119/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 ||||| || |||| ||||| ||| ||||||||||| ||||| || || ||| | | Sbjct 49178 GAGCGCCTGGTCGCTTTTGCCGCTGTCGAGGGTATCTTTTTCTCGGGCTCGTTCGCCTCC 49237 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || | |||||||||||| || || |||||||| || || | ||||| |||||||| ||| Sbjct 49238 ATCTTTTGGCTCAAGAAACGTGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATC 49297 Query 94924 TCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 || ||||||||||| || ||| ||| |||||| Sbjct 49298 TCGCGTGACGAGGGCCTGCACACAGACTTTGCG 49330 >seq3 Length=1325307 Score = 91.5 bits (100), Expect = 2e-13 Identities = 197/295 (67%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| || || ||||||||||| || || || || || ||||||||||| || Sbjct 270774 TTGATGATCAGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCGGTCATGATCATCAGG 270833 Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279 | || || || || | ||| | |||| |||| || || || || || | ||| Sbjct 270834 CTGCCGTAGCGCAGGCCATCAACGCTGTCATAGACCTTGCCGTGCTGCAGCCCGAGAATC 270893 Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACA 169339 | ||||| | |||| ||| ||| ||| ||| | || || ||||| ||| Sbjct 270894 TCCTTGATGTGCTTGATCTCGGCGTTCTTCATGATCTGGTCGTGCGACGCCTCGCGCACA 270953 Query 169340 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGA 169399 || |||| || || || ||||| || ||||| ||| ||||| || || || Sbjct 270954 TTGAGCAACTTACCGCGCAGCGGGAACACGCCGTACGCATCGCGACCCACCTCGCTGATG 271013 Query 169400 CCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATT 169454 |||| || || || | ||| |||||||||||||| |||| ||||||||| |||| Sbjct 271014 CCCGATACGGCAAGCGCCTTGGCCGAGTCACCCTCCGTGAGGATGAGCGTGCATT 271068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260668766320