Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 300 2e-76 seq3 145 8e-30 >seq8 Length=411764 Score = 300 bits (332), Expect = 2e-76 Identities = 528/761 (69%), Gaps = 6/761 (1%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| ||||| |||| |||||||| || || | | | | ||||||||| || Sbjct 37522 ATGCGTGTCGCTATGGGCATCCACGGCGAGGATGTGAAGAGCGCGATCGAGACGTACAAC 37463 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 || ||| | | ||| |||||||||||| |||| ||||||||||| ||||| ||| Sbjct 37462 TTCATGTCCGAGAAGGCCTTTACGCACGCGTCGCCGACCCTGTTCAATGCTGGCACGCCC 37403 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 |||| || |||||| ||||||||| ||| |||||||| |||||||| || || || Sbjct 37402 AACCCCCAAATGTCGTCCTGCTTCCTTGTGAGCATGAAGGACGACTCGATTGAGGGTATT 37343 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 || || ||||| ||| |||||| ||| |||| | | |||||||| || | || Sbjct 37342 TATGACACGCTTAAGACGTGTGCGATGATCAGCAAGACGGCCGGTGGTATTGGCCTGAAC 37283 Query 53435 TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGA 53494 | ||| |||| |||| ||| | || || |||||||| || | | || Sbjct 37282 ATCCACAACATCCGCGCGACGGGCTCGTACATTGCCGGTACGAACGGTGTGAGCAACGGT 37223 Query 53495 ATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGG 53554 || ||||| ||||| ||||| | ||||||||| || || ||||| |||||||||| Sbjct 37222 ATTGTGCCCATGCTTCGCGTGTACAACAACACAGCGCGCTACGTGGACCAGGGTGGCAAC 37163 Query 53555 AAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTT 53614 |||||| || | || || || ||||| ||||| |||||| | ||| | | ||||| Sbjct 37162 AAGCGCCCCGGCGCCTTTGCGATTTACCTGGAGCCATGGCACTCGGACGTGTTTGAGTTC 37103 Query 53615 CTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGC 53673 | || ||||| ||| || ||| | || ||| |||| ||| || |||||||| || Sbjct 37102 ATTGATCTGCGCAAGAACCATGGTAAGGAGGAGGTGCG-TGCGCGCGACCTGTTCCTGGC 37044 Query 53674 TCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGAT 53733 |||||| |||| ||| | ||||||| || ||| || ||| || |||| ||||| Sbjct 37043 GCTGTGGGTTCCCGACTTGTTCATGCGCCGCGTTGAGCAGAACGGCGACTGGTCGCTGAT 36984 Query 53734 GTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAGATGT 53792 |||||| |||||||| ||||| | | || ||| |||||||||||| | | ||| Sbjct 36983 GTGCCCCGCTGAGTGCCCGGGCCTGGCCGACTG-CTATGGTGAGGAGTTTGATGCTCTGT 36925 Query 53793 ATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGG 53851 | || |||| || | |||||||| |||| || ||||||| || | ||| Sbjct 36924 ACGAGAAATACG-AGCGCGAGGGCCGCGCCAAGCGCTCTGTTAAGGCGCAGAAGCTGTGG 36866 Query 53852 GATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCG 53911 | || || ||| || ||| | |||||||| | || | ||| |||||||| ||| Sbjct 36865 TACGCCATTCTCGAGGCGCAGATCGAGACGGGCAACCCCTTCATCCTGTACAAGGACTCG 36806 Query 53912 GTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 | ||| |||||||||||||||||| | ||| ||||| Sbjct 36805 GCAAACCGCAAGAGCAACCAGAAGAACCTGGGCACGATCAA 36765 Score = 156 bits (172), Expect = 5e-33 Identities = 348/513 (68%), Gaps = 22/513 (4%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || ||||| ||||| ||||| ||||| || ||||| ||||| | ||||||||||| | Sbjct 49290 TCGTTCGAGAACGACAGGCCGGGCATGAGGCCACGTTTCTTGAGCCAAAAGATGGAGGCG 49231 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 || || || ||| ||||| || |||||| ||||| ||||| ||||| | || |||| Sbjct 49230 AACGAGCCCGAGAAAAAGATACCCTCGACAGCGGCAAAAGCGACCAGGCGCTCCGAGAAC 49171 Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 | || || ||| ||||| | | ||||| || || ||| | ||||| |||| Sbjct 49170 GAGGC-GCGCTTGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACAGG 49112 Query 74966 GACAGTATCGATCGCTTGGAAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTG 75023 || ||| ||||| || | |||||| || || || || || || || | | || Sbjct 49111 GATAGTCTCGATGGCATTAAAGAGGAACTCGC--GCTGCTCCGGCTCGCGGATGTACGTG 49054 Query 75024 TCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAG 75083 || || | ||||||||||||||||| || || ||| | | |||| | ||||| Sbjct 49053 TCGATGAGGAGTGAGTACGTCTCCGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAG 48994 Query 75084 AAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCA 75141 ||| | || ||||| || ||| || || | |||| || | | ||||| Sbjct 48993 AAACAGCGGGCCTCGGCCGCCTGCACCTCGGCGCTGAAGCGCTC--TACCAGGTTCTCGT 48936 Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC-- 75199 | || ||||| ||||| || || || || ||||| || | | |||||||||||| Sbjct 48935 TAACAATGCCATCCGATGCAGCAAAGAAGGCCAGGACGTGGCTAACAAAGTGGCGCTCGT 48876 Query 75200 -ATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCG 75258 |||| || | | |||||| || | ||||||| || || || ||||||||| | | Sbjct 48875 TGTCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCCTTCGACAGGTCCATCTCCTCGGCAG 48816 Query 75259 TCCAGAA--ACTCCCAATC-GCCTTTTTGTACA 75288 ||||||| || || || ||||| ||||||| Sbjct 48815 TCCAGAACGACGCC---TCGGCCTTCTTGTACA 48786 >seq3 Length=1325307 Score = 145 bits (160), Expect = 8e-30 Identities = 302/445 (68%), Gaps = 10/445 (2%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || |||||||| || || || || | || | | ||| ||||| || ||||| || Sbjct 269895 CCCGTGCCGATACCGTCGGCGCCGTTGAGGAGCACCTGCGGTACGACCGGCACGTACCAC 269954 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | ||||| || | ||| ||||||| ||| | ||| ||||| Sbjct 269955 TCGGGCTCGATGCTCTGCCCGTCCTCGTCAAGGTAGTTGAGCAGCGCGTCGTCCTTCGGA 270014 Query 117272 TCGAATATGTT---CTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | ||| | | | | | | ||| | ||| ||||||||||||||| | ||| || Sbjct 270015 TGGAAGAGCTGGCGCGTAATGCGCGGCAC--GGC-AGTGAAAATGTAACGGGCGCTGGCC 270071 Query 117329 GCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388 ||||||||||| || | ||||||||| || || || | ||| | | |||| Sbjct 270072 GCATCCTTGCCGCCCATACTACGCGTACCAAACTGGCCGTTGGGCATGAGCATATTCACA 270131 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGG--AGGCTCGCCT 117446 |||||| ||| ||||| ||| || | ||| ||||| | || || ||| | Sbjct 270132 TTGTTGCTGCCGCAAAAGTCTTGTGCGAGACCGACGATCGT--CATGACCAGACTCTGGT 270189 Query 117447 CACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGT 117506 | || ||||| |||||||| ||||||| |||||||||| |||||| |||||| || | Sbjct 270190 CGCCGTGGTGGTACGCCGTGTGCTCCGACACGTAGCCCTGCAGCTGTTGCACCTTGATTT 270249 Query 117507 CTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGAC 117566 | | | | ||||| ||||| |||| | | | ||||||||||| | || || || | Sbjct 270250 CCGTCTTGAGGTTGCGCTTGAAGCAGCCGAACAGGACCTTGCGCTGGCCCGGTTTGAGGC 270309 Query 117567 CATCCGCCACGTGAGGGATCGAACG 117591 |||| | ||| |||||||| || Sbjct 270310 CATCGACGACGCTGGGGATCGAGCG 270334 Score = 143 bits (158), Expect = 3e-29 Identities = 239/345 (69%), Gaps = 8/345 (2%) Strand=Plus/Plus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || || ||||||||||||||| || |||| ||| |||||||||||||||||| Sbjct 270773 GTTGATGATCAGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCGGTCATGATCATCAG 270832 Query 152829 ACGACCGTAGCGCAGGTC----ACGTAGTGACCCGTAGACCTTTCCATGTTGAAGCCCGA 152884 | |||||||||||| | ||| || | |||||||| || || || ||||||| Sbjct 270833 GCTGCCGTAGCGCAGGCCATCAACGCTGT----CATAGACCTTGCCGTGCTGCAGCCCGA 270888 Query 152885 GGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCC 152944 | |||| |||| || | || | || | | | ||| | || || || | Sbjct 270889 GAATCTCCTTGATGTGCTTGATCTCGGCGTTCTTCATGATCTGGTCGTGCGACGCCTCGC 270948 Query 152945 GAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAACGC 153004 | |||||| || ||| || || || || ||||||||| |||| | ||| || || ||| Sbjct 270949 GCACATTGAGCAACTTACCGCGCAGCGGGAACACGCCGTACGCATCGCGACCCACCTCGC 271008 Query 153005 TCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGT 153064 | | || | | ||||| || || |||||||||||||| |||| || ||||| || | Sbjct 271009 TGATGCCCGATACGGCAAGCGCCTTGGCCGAGTCACCCTCCGTGAGGATGAGCGTGCATT 271068 Query 153065 CGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 || || | || || ||||| || || || || ||||||| Sbjct 271069 CGGCGCTGCGCTTCGTGCCCGCCCAATTAGCATCCTCGAGCTTGG 271113 Score = 138 bits (152), Expect = 1e-27 Identities = 228/329 (69%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || |||||||| || || || || | ||| ||||||||||||||||||| |||||| Sbjct 270783 AGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCGGTCATGATCATCAGGCTGCCGTAG 270842 Query 118073 CGTAAATCTCTCAGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGG 118132 || | | | | || ||| ||||| || || || |||||||| |||| || | | Sbjct 270843 CGCAGGCCATCAACGCTGTCATAGACCTTGCCGTGCTGCAGCCCGAGAATCTCCTTGATG 270902 Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGC 118192 | | || | || | | | | ||| | | || || || || ||| || | Sbjct 270903 TGCTTGATCTCGGCGTTCTTCATGATCTGGTCGTGCGACGCCTCGCGCACATTGAGCAAC 270962 Query 118193 TTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAATA 118252 ||||| ||||| || |||||||| || || || ||||| |||| | ||| | | Sbjct 270963 TTACCGCGCAGCGGGAACACGCCGTACGCATCGCGACCCACCTCGCTGATGCCCGATACG 271022 Query 118253 GCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGATGA 118312 ||||| ||||| |||||||||||||| || | || || ||||| |||| |||||| | Sbjct 271023 GCAAGCGCCTTGGCCGAGTCACCCTCCGTGAGGATGAGCGTGCATTCGGCGCTGCGCTTC 271082 Query 118313 GTACCGGCCCAATTAGCATCATCCAGCTT 118341 || || |||||||||||||| || ||||| Sbjct 271083 GTGCCCGCCCAATTAGCATCCTCGAGCTT 271111 Score = 122 bits (134), Expect = 1e-22 Identities = 206/292 (71%), Gaps = 10/292 (3%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACC--TGCCAGCCGCGTTCCAAACT 152086 ||||| ||||| |||| |||||||||||||||||| || | | | ||||| ||||||| Sbjct 270048 GTGAAAATGTAACGGGCGCTGGCCGCATCCTTGCCGCCCATACTA--CGCGTACCAAACT 270105 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCT-GAGCCAAATTC 152145 | || |||| ||| | || | |||||| ||| | ||| ||| | || | | Sbjct 270106 GGCCGTTGGGCATGAGCATATTCACATTGTTGCTGCCG-CAAAAGTCTTGTGCGAGACCG 270164 Query 152146 ACAATCGTGCCCTG--CAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGT 152203 || ||||| | || ||||||| || |||||||| |||||||| ||||||| | || Sbjct 270165 ACGATCGT--CATGACCAGACTCTGGTCGCCGTGGTGGTACGCCGTGTGCTCCGACACGT 270222 Query 152204 ATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAA 152263 | ||| || ||| |||||| || |||||| | ||||| ||||| ||| || | | Sbjct 270223 AGCCCTGCAGCTGTTGCACCTTGATTTCCGTCTTGAGGTTGCGCTTGAAGCAGCCGAACA 270282 Query 152264 TCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 |||||||||||| ||||| | || || || ||| || ||||| || Sbjct 270283 GGACCTTGCGCTGGCCCGGTTTGAGGCCATCGACGACGCTGGGGATCGAGCG 270334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215876876400