Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq6 158 3e-33 seq4 143 6e-29 seq1 96.9 8e-15 >seq6 Length=598762 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| |||||| ||| || |||||||| || || ||||| | ||||| Sbjct 367052 AGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCC 366993 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| ||||| |||||||| || || | || ||||||||| Sbjct 366992 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 366933 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| || || ||||| || ||||||||| Sbjct 366932 TGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 366873 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || || ||||| Sbjct 366872 TTCCCGGTAAGGGTCTTGACGAAGACTTGCAT 366841 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| | ||| ||| || ||||| || || || || || | || || Sbjct 457106 AGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTACGCCCGTCC 457165 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| ||||| || ||||| || |||| || ||||||||| Sbjct 457166 TCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 457225 Query 211023 TGGATCTT 211030 |||||||| Sbjct 457226 TGGATCTT 457233 >seq4 Length=1186009 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || || ||||| || || ||||| | ||||| Sbjct 398240 AGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCC 398181 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || || |||||||| ||||||| || ||||||||| Sbjct 398180 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 398121 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| || || ||||| || ||||||||| Sbjct 398120 TGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTC 398061 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | ||||| Sbjct 398060 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 398029 >seq1 Length=1477453 Score = 96.9 bits (106), Expect = 8e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 211005 GGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCA 211064 |||| || ||||||||||||||||| || || || ||||| ||||| || || Sbjct 495166 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCG 495225 Query 211065 ACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||||||||||||||||| ||||| || ||||| ||||| | ||||||| Sbjct 495226 ACCTCGAGAGTGATCGTCTTACCCGTCAGGGTCTTAACAAAGATCTGCATT 495276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151732670570