Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq75 120 6e-22 seq74 86.0 1e-11 >seq75 Length=415383 Score = 120 bits (132), Expect = 6e-22 Identities = 370/563 (66%), Gaps = 16/563 (3%) Strand=Plus/Plus Query 319470 GGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTT 319529 ||| || || ||| |||||| ||||||||| |||||||| | |||| | | | Sbjct 253008 GGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGAT---CGAAGTGGCGCT 253064 Query 319530 AAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGA--AAGATGGTTGGTC 319587 | || |||||| || | | ||| |||||| || | | ||| ||||| ||| Sbjct 253065 GGTGGTGCGCAGGTAGTCGGTGATCCAAGCCACGTT-GATAACGTCCAAG-TGGTTCGTC 253122 Query 319588 GGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTC 319647 ||||| || || ||||| | | || || | |||| ||||| || || ||||| ||| Sbjct 253123 GGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGGGCCAGGGCGAGCTTC 253182 Query 319648 ATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATCAAAGCCA 319707 || ||||| || || || || | | || ||| ||| || |||| |||||||| Sbjct 253183 ATCTTCCAGCCACCCGACAGGGCCGTGATGGGGCCAGCCTGACGCTGGTCGTCAAAGCCC 253242 Query 319708 ACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTACTTGTTCA 319767 | | | || || | | | ||||| | | || ||| | ||||| | Sbjct 253243 ATCTCAGCGAGGGTCTTCGAGGCAGTCTCACG-GTC--AACGTT--CAGGCGCTTGTCCT 253297 Query 319768 TCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATCGTGTTCC 319827 | ||| || ||||| | |||| ||| | || || |||||||| ||||| || Sbjct 253298 GC--TGG--ATAAAGTCCAGAATAGAAATGTCACCCTCCGAGCCGTCGAGGTCGTGCTCG 253353 Query 319828 ACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTTCACAATA 319887 ||||| || || | || | |||||||| || || | ||| |||||| || Sbjct 253354 ACGTACCAGGTGCGCACCTCCTCGGGCGAGGGGAAGCCCTCGACCTGACCGTTCTGGATG 253413 Query 319888 GCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCG 319947 |||||||||||||| || ||||| | ||||| | ||||| ||||||||||||| || Sbjct 253414 GCGCGCATCAGGGTCGACTTACCGGAACCGTTACGACCACAGAGACCGTAGCGGTGGCCA 253473 Query 319948 CGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAAT 320007 || || ||| | | | ||||||| ||||| || |||| || ||||| || || Sbjct 253474 CGCTTGAGGCGCAGGGTGGCGGTGTTCAGCAGAATCTTGGCACCGTAGGCCAGCGAGAAC 253533 Query 320008 TCACAATCACACAGATCCTCACC 320030 | ||| | |||||||||||| || Sbjct 253534 TGACAGTTACACAGATCCTCGCC 253556 >seq74 Length=174556 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || || ||||||||| || ||| | |||||||| || || || ||||||||| | Sbjct 123698 CTGATCGGTATGAACGCTCGCCTGATGTGCCAGTACATTGAGTTTGTGGCCGACCGCCTG 123639 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || || || || |||||||| | ||||||||||| ||||||||| Sbjct 123638 CTCGTCAACCTGGGCAACCCCAAGCACTACAACTCGACGAACCCCTTTGACTTTATGGAG 123579 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGA 230600 ||||||||| || || ||| | ||||| ||||| Sbjct 123578 AACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGA 123544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822414255710