Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq74 140 3e-28 >seq74 Length=174556 Score = 140 bits (154), Expect = 3e-28 Identities = 563/877 (64%), Gaps = 31/877 (4%) Strand=Plus/Plus Query 16679 TAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATG 16738 || ||| |||||| ||||||||||| | ||||||| || || || |||||||| Sbjct 123526 TAGTCGGCAACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAAATGTTCTCCATA 123585 Query 16739 AAATCAAAAGGATTAGT--AGCTGAAAATATT--TTAGAGTACCCCAGTTCGGCGATTAA 16794 || ||||| || || || || || || | || | || ||||| | | ||| | Sbjct 123586 AAGTCAAAGGGGTTCGTCGAGTTG----TAGTGCTTGGGGTTGCCCAGGTTGACGAGCAG 123641 Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACG 16854 | || || ||||| || || || |||||||| | |||||| || || || Sbjct 123642 GCGGTCGGCCACAAACTCAATGTACTGGCACATCAGGCGAGCGTTCATACCGATCAGCGA 123701 Query 16855 TACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACT 16914 || || ||||| || |||||||| ||||| || | || || || | ||||| | Sbjct 123702 GACAGGCAGAGCATCGGTCAAAAAGTCCTGCTCAATGGCCACGGCCTCGGTGATAATGCG 123761 Query 16915 AGCAACTCGTTCCTCGGA-CG-GTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 || ||| | || || | | | || || ||| | |||| || || || || Sbjct 123762 GTTCAC-CGTGTCAGGGTGCGCGCGCTTCTTCAA-ATGGCTGAACAAGAGGCAGGCAAAG 123819 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 ||| || | |||||||| | ||| || || || || || | | |||||||| Sbjct 123820 TCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCATTGGAGAACGAAAGACCGGGCATG 123879 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || || ||||| | ||| || |||| ||||||||| ||||| || || |||||||| Sbjct 123880 AGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCAGAGAAAAAGATACCCTCA 123939 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTT 17151 || | ||||| || | | || || | | ||| ||| |||| ||| ||||| Sbjct 123940 ACAGCGGCAAAGGCCACCAGGCGCTCCGAGAACGAGGCGCGCTTGTC-CGAGATCCAACG 123998 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211 | || |||||||||| || ||||| | | || || || ||||| || || | | Sbjct 123999 CAGCGCCCACTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGATGGCGTTGAAAAGGTA 124058 Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271 || | || | | ||| || || || |||||||| || ||| | || ||||| Sbjct 124059 TTCGCGCTGCTCTGGCTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTG 124118 Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 ||||||||||| ||||| || ||||| ||||| || || || || || || || Sbjct 124119 AATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGCGGCCTGCACCTC 124178 Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || ||| || ||| | || || ||||| ||||| ||||| || ||||| || || Sbjct 124179 GGCGCTGAAGCGCTCCACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCGAAGAAAGC 124238 Query 17392 CAATATATG-----CTTAATGA-----AATATTTTTCGTCCGGTGTAAGAACGCGCCAGT 17441 || | || | | ||| | | | ||| | ||||| | ||||| Sbjct 124239 CAGGACGTGGCTCACAAAGTGACGCTCATTGTCGTTCATGCGGTG-------GTCCCAGT 124291 Query 17442 CCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTT 17501 | | || || || || | |||| || |||| |||||| || ||| | ||||| | Sbjct 124292 CGTGCAAGTCCTTCGACAGGTCCATCTCCTCGGCGGTCCAGAACGAGGCCTCCGCCTTCT 124351 Query 17502 TATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 | ||||| | |||||| || | ||| | |||||||| Sbjct 124352 TGTACATCTGCCAAATCTCGTGGTAGCGAATGGGGAA 124388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544843089560