Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq74 131 2e-25 >seq74 Length=174556 Score = 131 bits (144), Expect = 2e-25 Identities = 423/654 (65%), Gaps = 2/654 (0%) Strand=Plus/Minus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 || ||||| | |||||| || |||| | || || || ||| || || ||||||||| Sbjct 136392 GGGCACATAAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAGGTCAGGAATC 136333 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115 || || || | || || || | | | ||||| || || ||||| || Sbjct 136332 CACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCGTGGTTCTTGCGCAGG 136273 Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175 || | |||| | | | || || |||||||| || | ||| || | | |||| || Sbjct 136272 TCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATCGCAAAGGCTCCGGGG 136213 Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 136212 CGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCAGTGTTGTTGTACACGCGGAGCATCGGC 136153 Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 54295 | |||||| ||| |||| || || || | || ||| || |||||||||| || Sbjct 136152 ACAATACCGTTGCTGACACCGTTCGTGCCAGCAATGTAGGAGCCTGTGGCACGAATGTTG 136093 Query 54296 CTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 54355 || ||||| || || || ||| | || ||| | ||||| || | ||| Sbjct 136092 TGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGATCATAGCGCAGGTCTTGAGCGTG 136033 Query 54356 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 54415 || || || ||||| || || ||| |||| | | || || ||| ||||||||| Sbjct 136032 TCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCACAAGGAAGCAGGACGACATTTGG 135973 Query 54416 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 54475 | | || || || || || | ||| || || |||||||| || || || || Sbjct 135972 GGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGTGCGTGAAGGCCTTCTCGGAC 135913 Query 54476 A-GTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 54534 | |||| ||||| |||||||| || | | |||| || || ||||| || || Sbjct 135912 ATGTAG-TTGTAGGTCTCGATGGCGCTCTTCACATCCTCGCCGTGGATGCCTACAGCAAC 135854 Query 54535 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA 54594 |||||| | |||||||||||| | || ||| |||| ||| || ||| | |||||| Sbjct 135853 ACGCATGAGCATGTGCTGAGGGCGCTCCGCGACCTTGCCGTTGATGCGCAGGAGGTAGGA 135794 Query 54595 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 54648 || | || || || || || ||||||| |||||| || |||||||| Sbjct 135793 GCGCTCAAGCGTCTTGAAGCCGAAGAAGTTGTAGTGAAAGTCGCGCTCGTAAAT 135740 Score = 86.0 bits (94), Expect = 7e-12 Identities = 181/267 (68%), Gaps = 5/267 (2%) Strand=Plus/Plus Query 24117 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 24176 ||||| | |||| | || || || ||| ||| ||||||||||| | || | Sbjct 123793 AAATGGCTGAACAAGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGC 123852 Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236 || ||||| |||| || |||||||| || |||||||| || ||||| || || || || Sbjct 123853 TCATTGGAGAACGAAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCG 123912 Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296 || || ||||| || || || || || || || |||||||| | || | || | | || Sbjct 123913 AACGAGCCAGAGAAAAAGATACCCTCAACAGCGGCAAAGGCCACCAGGCGCTC-CGAGAA 123971 Query 24297 C-CGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352 | ||||| |||| ||||| | ||||| |||||||||| || || || Sbjct 123972 CGAGGCGCGCTTGTCCGAGATCCAACGCAGCGCCCACTCGGCCTTCTGCTTGACGACGGG 124031 Query 24353 CATTGTCTCTATAGCATTAAAGAGATA 24379 || ||||| || || || || || || Sbjct 124032 GATGGTCTCGATGGCGTTGAAAAGGTA 124058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720731682160