Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq111 140 4e-28 >seq111 Length=547826 Score = 140 bits (154), Expect = 4e-28 Identities = 273/399 (68%), Gaps = 16/399 (4%) Strand=Plus/Minus Query 145874 AGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCC 145933 |||||||||||| | |||||||||||||||||||| | ||| || ||||| |||| Sbjct 337627 AGAACTGGCACAAAATATGGCAGGGCGGCAGGGCCATCTTGTCCAGATCAGCCGGATTCC 337568 Query 145934 AGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCA---GGT 145990 | ||| | || | || | || | | |||||| ||||||| | || | || Sbjct 337567 ACGCGCTCAGCAAGATACGCCGGTCCGTCGGGTTCGTCTTGATTTGATGAATGACCTGGG 337508 Query 145991 CCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCC 146050 || | ||| || |||||||||||| |||| | ||| | || |||||||||| ||| | Sbjct 337507 CC---AACTGATCGACGCCCTGCCCCTGGTAGTTTGTATCGGCGTCCACGTACTTGGCAC 337451 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCA 146110 | ||||| | ||||||||| || || ||||| |||| ||| || | ||| |||| Sbjct 337450 CAAAGTGACGCCACTGGAAGCCATACACGGGGCCCAAGTCGCCTTCGCGACGGTGTCCCA 337391 Query 146111 GCCC-GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTC 146169 |||| | || | ||||| ||| || ||| | ||||| || | || | | Sbjct 337390 GCCCACGTTTCTGC-AAAAAGTCGGCGGAACCATTGCCATCCCAAAT----ATGCACATT 337336 Query 146170 GCGG----AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAG 146225 |||| |||| |||||||||||| | || ||||||||| ||||| || || || Sbjct 337335 GCGGTCACTGAGCCACTTGGAGTCCGTGCAACCTGCGATGAACCACAGCAGTTCCTCCAG 337276 Query 146226 GACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 || || | |||| || | ||| || |||| |||||| Sbjct 337275 CACGCCACGATAGAACACACGCTTCGTTGTCAACAGGGG 337237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075937012680