Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq74 495 4e-135 seq111 136 4e-27 seq106 134 1e-26 >seq74 Length=174556 Score = 495 bits (548), Expect = 4e-135 Identities = 630/853 (74%), Gaps = 17/853 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| |||||| || || ||| | |||||||| | |||| || Sbjct 124427 GAGCCGCTGCTGAAGGAGAACAAGTCGCGCTTTGTGCTCTTCCCCATTCGCTACCACGAG 124368 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| ||||||||||||| ||||||| |||||||| Sbjct 124367 ATTTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTG 124308 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||||| | || |||||||||| ||||| || || | | Sbjct 124307 TCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGTCACTTTGTGAGC 124248 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| ||||| || ||||| || ||||| |||||||||||||| ||||| ||||| Sbjct 124247 CACGTCCTGGCTTTCTTCGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTGGAGCGC 124188 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| |||||||| || |||||||||||||| |||||| || Sbjct 124187 TTCAGCGCCG-AGGTGCAGGCCGCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 124129 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | || ||| |||||||||||| ||| | ||| | || Sbjct 124128 GGAGAACATTCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATCCGCGAGCCAGA 124069 Query 116932 GGAGAAGC---TCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | || || | | ||| | |||||||||||||| || || |||||| ||||||| Sbjct 124068 GCAGC-GCGAATACCTTT--TCAACGCCATCGAGACCATCCCCGTCGTCAAGCAGAAGGC 124012 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGG 117047 ||||||||||||||| |||||| | | || || | ||| | ||| ||||||||||||| Sbjct 124011 CGAGTGGGCGCTGCGTTGGATCTCGGACA-AGCGCGCCTCGTTCTCGGAGCGCCTGGTGG 123953 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 |||| || || || ||||| |||| || || ||| |||||| | || || ||||||| Sbjct 123952 CCTTTGCCGCTGTTGAGGGTATCTTTTTCTCTGGCTCGTTCGCCTCGATCTTCTGGCTCA 123893 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || ||||||||||| || | ||| ||| ||||||||||| | ||||||| Sbjct 123892 AGAAGCGTGGTCTCATGCCCGGTCTTTCGTTCTCCAATGAGCTCATCTCGCGTGACGAGG 123833 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCG 117226 ||||||| |||||||||||| | |||||| |||||| | |||| || | | | Sbjct 123832 GTCTGCACACCGACTTTGCCTGCCTCTTGTTCAGCCATTTGAAGAAGCGCGCGCACCCTG 123773 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | || || | || ||||||| || || ||||| |||||| ||| | ||||| Sbjct 123772 ACACG-GTGAACCGCATTATCACCGAGGCCGTGGCCATTGAGCAGGACTTTTTGACCGAT 123714 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTT 117345 || ||||| || ||| | || | || || | ||||| || ||||| ||||| Sbjct 123713 GCTCTGCCTGTCTCGCTGATCGGTATGAA-CGCTCGCCTGATGTGCCAGTACATTGAGTT 123655 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 || |||||| | ||||| || | |||| | | |||||||||||||| || | ||||| Sbjct 123654 TGTGGCCGACCGCCTGCTCGTCAACCTGGGCAACCCCAAGCACTACAACTCGACGAACCC 123595 Query 117406 GCTGGACTTTATG 117418 | ||||||||| Sbjct 123594 CTTTGACTTTATG 123582 >seq111 Length=547826 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| | || || || || | Sbjct 165717 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 165776 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| |||||||| || ||||||| Sbjct 165777 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 165836 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| |||||||||| |||||||||| Sbjct 165837 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCAGCGACTACAAC 165896 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| ||| ||||| || ||| Sbjct 165897 ATTCAGAAGGAGAGCACCCTGCACCTCGTG 165926 >seq106 Length=438498 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || || ||| |||| || || | || Sbjct 198073 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATTACCCTCGAGGTGGAGTCTTCC 198014 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||| ||||| ||||||| Sbjct 198013 GACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 197954 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| || | ||||| || | |||||||||| Sbjct 197953 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAAC 197894 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||||| || || ||| ||||| || | || || Sbjct 197893 ATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 197847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218446491920