Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq74 136 3e-27 seq111 122 8e-23 seq106 113 4e-20 >seq74 Length=174556 Score = 136 bits (150), Expect = 3e-27 Identities = 248/360 (69%), Gaps = 11/360 (3%) Strand=Plus/Minus Query 44942 ATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAAC 45001 |||||||| || |||| ||| || | || ||| | ||||| |||||||||||| || Sbjct 123878 ATGCCCGGTCTTTCGTTCTCCAATGAGCTCATCTCGCGTGACGAGGGTCTGCACACCGAC 123819 Query 45002 TTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGGACGCGCCC----ACCGT 45057 ||||||||||||| | | | | | || | ||| | ||| ||| || || Sbjct 123818 TTTGCCTGCCTCTTGTTCA----GCCATTTGA--AGAAGCGCG-CGCACCCTGACACGGT 123766 Query 45058 CAACGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCC 45117 ||| ||| || |||| ||||||||||| ||| ||| ||||| | || |||||||| Sbjct 123765 GAACCGCATTATCACCGAGGCCGTGGCCATTGAGCAGGACTTTTTGACCGATGCTCTGCC 123706 Query 45118 CGAATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGA 45177 | ||| || | || |||||||| ||||| | |||||||||||||||| ||||| Sbjct 123705 TGTCTCGCTGATCGGTATGAACGCTCGCCTGATGTGCCAGTACATTGAGTTTGTGGCCGA 123646 Query 45178 TCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTT 45237 || || |||||| | | | |||||| ||| | | |||||| || || || Sbjct 123645 CCGCCTGCTCGTCAACCTGGGCAACCCCAAGCACTACAACTCGACGAACCCCTTTGACTT 123586 Query 45238 TATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATA 45297 |||| | || |||||| | ||||||| | || ||||| ||| ||||| | ||| || Sbjct 123585 TATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 123526 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 134412 AGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACAC 134471 || || | |||||| || || | ||||||||| || || ||||| || || || Sbjct 136038 AGCGTGTCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCACAAGGAAGCAGGACGAC 135979 Query 134472 ATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGC 134529 ||||| | | ||||||| || ||||| ||||| ||||||||| |||| | | Sbjct 135978 ATTTGGGGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGTGCGTGAAGGCCTTC 135919 Query 134530 CCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCA 134589 | ||| || | | || || || ||| ||||||| || || |||||||| ||| | | Sbjct 135918 TCGGAC--ATGTAGTTGTAGGTCTCGATGGCGCTCTTCACATCCTCGCCGTGGATGCCTA 135861 Query 134590 GAGCGACGCGCATGAGCATGTGTTGGGGTCTCTCC 134624 ||| || |||||||||||||| || || | |||| Sbjct 135860 CAGCAACACGCATGAGCATGTGCTGAGGGCGCTCC 135826 >seq111 Length=547826 Score = 122 bits (134), Expect = 8e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||||| | ||||| ||||||||||| || || ||| | Sbjct 165908 CTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 165849 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || ||||| || || ||||| |||||||||||||| || || || || | Sbjct 165848 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 165789 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| | ||| ||||| | || | ||| ||||| |||||||| || || Sbjct 165788 GTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 165729 Query 118727 AAAAATCTGCATGGC 118741 || || |||||||| Sbjct 165728 GAAGATTTGCATGGC 165714 >seq106 Length=438498 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||| || || |||||||| ||||||| |||||| ||| Sbjct 197861 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATC 197920 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || |||||| |||| || ||||| || || ||||| || ||||||||||| Sbjct 197921 CTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 197980 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| ||||| | ||| ||||||| ||| | ||| Sbjct 197981 CTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTAATCGT 198040 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || ||||| || || || || || | ||||||| Sbjct 198041 CTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 198075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829781384964