Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq111 109 6e-19 seq106 104 3e-17 >seq111 Length=547826 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||||||||||| ||||| ||||| || || || || |||| || |||||| Sbjct 165919 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGCTGC 165860 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || ||||| || || ||||| ||||| | || | || |||||||||| ||| || Sbjct 165859 TTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 165800 Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160 |||| | | | |||||| || || || || | |||||| || ||||| || Sbjct 165799 GCCTTGACATTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCAGTC 165740 Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||||||||| Sbjct 165739 AGAGTCTTGACGAAGATTTGCAT 165717 >seq106 Length=438498 Score = 104 bits (114), Expect = 3e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||| | || | ||||||||||| || || ||||| || |||||| || | Sbjct 197859 CGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCA 197918 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| |||||||| || || ||||| ||||| | || | | ||||||| Sbjct 197919 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTG 197978 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| || | | ||||||| || ||||| |||| || || Sbjct 197979 TCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTAATC 198038 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || ||||| || || | |||||| Sbjct 198039 GTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 198073 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||| | ||||| ||||||||||||||| |||||||| || ||||| || | Sbjct 106786 ACGCAGCACGAGATGCAGTGTGCTCTCCTTTTGGATATTGTAGTCGCTTAGAGTGCGTCC 106727 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||||||||| || || || ||||||||||| | || | | ||||| Sbjct 106726 ATCTTCCAGCTGCTTACCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATCCCTTCCTT 106667 Query 43088 GTCCATGATTTTTTGTTTGA 43107 |||| ||| || ||||| Sbjct 106666 GTCCTGGATCTTGGTTTTGA 106647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816763716760