Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq74 441 6e-119 seq111 107 2e-18 seq106 98.7 9e-16 >seq74 Length=174556 Score = 441 bits (488), Expect = 6e-119 Identities = 1029/1536 (67%), Gaps = 48/1536 (3%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| ||||| || ||||| |||| | || ||||| |||||||||| ||| ||| Sbjct 137258 GGTTGACCACCTGGAACTCACCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTACG 137199 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | ||||| | || ||| |||| |||||| |||||| || || ||||| ||||||| Sbjct 137198 GCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTCGAGGCCGTGGGCATAGGCGCCA 137139 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 ||| | |||||| | ||| ||||||| | ||| || |||||| | |||||||| Sbjct 137138 TCAGCAACGAGTTGCGCAAACCGTGCTGGGCAATCTTTGCCTTGAGGGAGGCCCAGTCCC 137079 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689 |||| || | |||||| || ||| ||||| ||||| | || |||| || Sbjct 137078 ACAGGTCCGTCGGCGTGCGGTT---CCAGTGGTCGTACTGCAAGAGACCCTGCGAA--GC 137024 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 |||||||| |||||||| ||||| || ||||| || || || |||||||| ||| Sbjct 137023 AGGGCTGCCCTCGTACGTCTCGTAGGGGCCATACTCGGCAGCCAGCTCGCAGCTGCGCTC 136964 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGC 22808 || ||| ||| ||| |||||||||||||| | | ||||| |||| || | || Sbjct 136963 CAGCGCCGCGTGATAGATAGTCTCGAAGATCTGCACGTTCAGCA-GGCGCGCCTCCTGGC 136905 Query 22809 TTTCGTACGGCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867 | ||| |||| ||| | ||| |||| ||||| ||||||| |||||| || || |||||| Sbjct 136904 TGTCGAACGG-ATAGCCCATGATCATAAACGCATCCGCCAGACCCTGGACACCGATACCG 136846 Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTTTTGC-CTCGGGCAAAGGATACCAATTCGAATC 22926 || || |||| || ||||| || ||| || || || | || || Sbjct 136845 ATGGGGCGGTGGCGCATGTTCGAGCGGCGCGCACTCTC-CACGGGGTAGTAGTTGATGTC 136787 Query 22927 GATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTC 22986 ||| | | ||||||||| || || | |||| | | |||| Sbjct 136786 GATGATGCGGTTCAAGTTCTTGCAAACCACCTTCGACACGTCGTGCAGGCGCTGGAAGTT 136727 Query 22987 GTAA-------ACGCCCGATTGTAC--AACAAACTTGTTGACGGCGATCGAGGCAAGATT 23037 ||| | || | | || | || || | | || |||||||| || || Sbjct 136726 GTACGTCTTCGAAGCGCCAGTGCCCTCAATGAAGGTCGGCAACGCAATCGAGGCCAGGTT 136667 Query 23038 GCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACA 23097 ||| ||||| |||||| || |||| || | ||||||||||| || || | Sbjct 136666 GCACACGGCAGTCTCGTCCGGCGAGCTGTATTCGATGATTTCGGTACACAGGTTCGAGCT 136607 Query 23098 CTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCAT 23157 ||| |||||||| | || |||||||||| || || ||| ||| |||||||| || || Sbjct 136606 CTTGATCGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCCGAGTCCTTGTACAGGAT 136547 Query 23158 GTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT- 23216 | | || |||| ||||||| ||| | ||| | || || ||| | |||| || | Sbjct 136546 GAAGGGATTGCCGGTCTCGATCTGGGCCTCCAAAATGGCGTACCAGAGCTTCTGCGCCTT 136487 Query 23217 ----GAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAAT 23272 || | | ||||||| ||| || ||||||||||| |||||| || ||||| Sbjct 136486 GACGGAGCGCTTCGCACG-----GCCCTCGCGCTCGTACTTTTCGTACAAGGCATCAAAC 136432 Query 23273 TCGGCACCGTAACAGTCGGCCAGGCCGGGCGATT--GCATCGGACACATGAGACTCCACA 23330 || | ||||| ||||| |||||||| || | | ||| || ||||| || ||| Sbjct 136431 TCCTCGCCGTAGCAGTCAGCCAGGCCCGGGCACTCGGCA--GGGCACATAAGCGACCAGT 136374 Query 23331 TTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTT 23390 || | || ||||| | ||| || || || || ||||| || || |||||| | Sbjct 136373 CGCCGTTCTGCTCGACGCGGCGCATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGGT 136314 Query 23391 CGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGT 23450 |||| || ||||||||||| || ||| |||||| || || | || || ||||||| Sbjct 136313 CGCGCGCACGCACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCAATGAACTCAAACACGT 136254 Query 23451 CCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGAT 23510 ||| ||||||||||||||||| | ||||| || || || | ||| ||||||||||| | Sbjct 136253 CCGAGTGCCACGGCTCGAGGTAGATCGCAAAGGCTCCGGGGCGCTTGTTGCCGCCCTGGT 136194 Query 23511 CGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGC 23570 | ||||| || || |||||||||||||| | ||||||||||| | ||||||| | | Sbjct 136193 CCACGTAGCGCGCAGTGTTGTTGTACACGCGGAGCATCGGCACAATACCGTTGCTGACAC 136134 Query 23571 CGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGC 23630 || ||| || | || ||| | || |||| |||||| | || | ||| || | Sbjct 136133 CGTTCGTGCCAGCAATGTAGGAGCCTGTGGCACGAATGTTGTGGATGTTCAGACCGATAC 136074 Query 23631 CTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGC 23690 | || ||| || ||||| ||||| || || |||||||| || ||||| || Sbjct 136073 CGCCAGCCGTCTTGCTGATCATAGCGCAGGTCTTGAGCGTGTCGTAAATACCCTCAATCG 136014 Query 23691 TGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCG 23750 ||| || || | || | ||| || || |||||||| | || |||||| | || Sbjct 136013 AGTCGTCCTTCATACTCACAAGGAAGCAGGACGACATTTGGGGGTTAGGCGTACCAGCGT 135954 Query 23751 AGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCAT-TC-GACAT-TAGATTGTACGTGT 23807 |||||| ||||| |||||||| ||| || | || ||||| ||| ||||| || | Sbjct 135953 TGAACAGGGTCGGCGACGCGTGCGTGAAG--GCCTTCTCGGACATGTAG-TTGTAGGTCT 135897 Query 23808 CGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATT 23867 |||||||| | | ||||| ||||| || || | || || ||||| | ||||| | Sbjct 135896 CGATGGCGCTCTTCACATCCTCGCCGTGGATGCCTACAGCAACACGCATGAGCATGTGCT 135837 Query 23868 GAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTT 23924 |||| | || ||||| | |||||| || | || || || || | | ||| | Sbjct 135836 GAGGGCGCTCCGCGACCTT---GCCGTTGATGCGCAGGAGGTAGGAGCGCTCAAGCGTCT 135780 Query 23925 TAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 | || || || ||| |||| |||||| || |||| Sbjct 135779 TGAAGCCGAAGAAGTTGTAGTGAAAGTCGCGCTCGT 135744 Score = 239 bits (264), Expect = 4e-58 Identities = 565/844 (67%), Gaps = 37/844 (4%) Strand=Plus/Minus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || |||||| | |||||||| ||||| || || ||||| ||||||| ||| || | ||| Sbjct 124370 GAGATTTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACCGCCGAGGAGATGGAC 124311 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCA---AAGAATCTGAGAGAAATTTTATT 57683 ||||| ||||| || ||| ||||| || || | || |||| | | ||| | Sbjct 124310 CTGTCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGTCACTTTGTG 124251 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 | ||||| |||| || ||||| || || || ||||| || |||||||| |||| || Sbjct 124250 AGCCACGTCCTGGCTTTCTTCGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTGGAG 124191 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 | || || ||||| | | ||||| | ||||| ||||| || || | Sbjct 124190 CGCTTCAGCGCCGAGGTGCAGGCCGCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATG 124131 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGT----GAAGGA 57859 || || ||| | || || || | || ||||| |||||||| || ||| | || | Sbjct 124130 ATGGAGAACATTCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATCCGCGAGCCA 124071 Query 57860 CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG-- 57917 | | || ||| || || |||||||| ||||| || || |||| ||| |||| Sbjct 124070 GAGCAGCGCGAA---TAC-CTTTTCAACGCCATCGAGACCATCCCCG---TCGTCAAGCA 124018 Query 57918 -AAGGCAGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGA 57972 ||||| |||||| | | ||||| | |||||| ||| ||||| | ||| Sbjct 124017 GAAGGCCGAGTGGGCGCTGCGTTGGATCTCGGACAAGCGC----GCCTCGTTCTCGGAGC 123962 Query 57973 GGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATAT 58032 | || | || || ||||| || || ||||| || || || ||| || || | || | Sbjct 123961 GCCTGGTGGCCTTTGCCGCTGTTGAGGGTATCTTTTTCTCTGGCTCGTTCGCCTCGATCT 123902 Query 58033 TTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGC 58092 | ||| | ||||| || || || |||||||| || |||| ||| ||| | || |||| Sbjct 123901 TCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTTTCGTTCTCCAATGAGCTCATCTCGC 123842 Query 58093 GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC 58152 | ||||||||||| || || || ||||| ||||| ||| || |||| | || || | Sbjct 123841 GTGACGAGGGTCTGCACACCGACTTTGCCTGCCTCTTGT--TCAGCCATT-TGAAGAAGC 123785 Query 58153 CGACGCGGGATCGCATCTTGGA---CATTATCACCGAGGCGGTCGCGATCGAAAATGAGT 58209 ||| | || || | ||||||||||||||| || || || || | || | Sbjct 123784 GCGCGCACCCTGACACGGTGAACCGCATTATCACCGAGGCCGTGGCCATTGAGCAGGACT 123725 Query 58210 TTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGT 58269 || | ||||| || || || || | || ||||||||||| | |||||| ||| Sbjct 123724 TTTTGACCGATGCTCTGCCTGTCTCGCTGATCGGTATGAACGCTCGCCTGATGTGCCAGT 123665 Query 58270 ACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGC---GTCATTACA 58326 ||||||||||||| |||||| | || | || | ||| || | | || |||| Sbjct 123664 ACATTGAGTTTGTGGCCGACCGCCTGCTCGTCAACCTG---GGCAACCCCAAGCACTACA 123608 Query 58327 ACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTT 58386 || ||| || || ||||| |||||| | || |||||| |||||||| | ||||||| Sbjct 123607 ACTCGACGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTT 123548 Query 58387 TCGA 58390 |||| Sbjct 123547 TCGA 123544 >seq111 Length=547826 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||||||||| ||||| |||||||| | || ||||| | || Sbjct 165716 CATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAGTCCTC 165775 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 165776 GGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 165835 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| || || ||||| ||||| ||| | || ||| | || | ||||| || || Sbjct 165836 ACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCAGCGACTACAA 165895 Query 31372 CATTCAAAAAGA 31383 |||||| || || Sbjct 165896 CATTCAGAAGGA 165907 >seq106 Length=438498 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||| | ||||| ||||| || || || || ||||| ||| |||| || || | || Sbjct 198074 CATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATTACCCTCGAGGTGGAGTCTTC 198015 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 198014 CGACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCA 197955 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| || || ||||||||||| ||| |||| || | ||| ||||||| || || Sbjct 197954 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAA 197895 Query 31372 CATTCAAAAAGA 31383 ||| || || || Sbjct 197894 CATCCAGAAGGA 197883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765748066640