Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq74 123 3e-23 >seq74 Length=174556 Score = 123 bits (136), Expect = 3e-23 Identities = 654/1039 (63%), Gaps = 14/1039 (1%) Strand=Plus/Minus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||| | |||||| || |||| | || || || ||| || || ||||||||| Sbjct 136392 GGGCACATAAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAGGTCAGGAATC 136333 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || || || | || || || | | | ||||| || || ||||| || Sbjct 136332 CACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCGTGGTTCTTGCGCAGG 136273 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 || | |||| | | | || || |||||||| || | ||| || || | |||| || Sbjct 136272 TCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATCGCAAAGGCTCCGGGG 136213 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 136212 CGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCAGTGTTGTTGTACACGCGGAGCATCGGC 136153 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | ||||||||| | ||| || || || | || ||| || |||||||||| || Sbjct 136152 ACAATACCGTTGCTGACACCGTTCGTGCCAGCAATGTAGGAGCCTGTGGCACGAATGTTG 136093 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63593 || ||||| || || || ||| | || ||| | ||||| || | |||| Sbjct 136092 TGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGATCATAGCGCAGGTCTTGAGCGTG 136033 Query 63594 TCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63653 || || || || || || || || |||| | | || || ||| ||||||||| Sbjct 136032 TCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCACAAGGAAGCAGGACGACATTTGG 135973 Query 63654 TGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63713 | || || || || || || | ||| || || |||||||| || || || || Sbjct 135972 GGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGTGCGTGAAGGCCTTCTCGGAC 135913 Query 63714 A-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 63772 | |||| ||||| ||||| || || | | |||| || || ||||| || || Sbjct 135912 ATGTAG-TTGTAGGTCTCGATGGCGCTCTTCACATCCTCGCCGTGGATGCCTACAGCAAC 135854 Query 63773 ACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGA 63832 |||||| | |||||||||||| | || | | ||| ||| || || | |||||| Sbjct 135853 ACGCATGAGCATGTGCTGAGGGCGCTCCGCGACCTTGCCGTTGATGCGCAGGAGGTAGGA 135794 Query 63833 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63892 || | || || || || || ||||||| |||||| || |||||||| | | Sbjct 135793 GCGCTCAAGCGTCTTGAAGCCGAAGAAGTTGTAGTGAAAGTCGCGCTCGTAAATCACCGC 135734 Query 63893 CGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT-GAAATAATCG 63951 ||| | |||| | || | || | || || || | ||| || || || | Sbjct 135733 CGAGTCGAGCGTGTCGCGGTTCTTCATCACCGCCTCGTACGT-CTCCTTGGAGATCATAG 135675 Query 63952 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 64011 | ||||||| | || || || || |||| | | | |||| || ||| | |||| Sbjct 135674 GGCTATGTTTCTTCGTCTTGGGGTTCACGTAGTCGTACAGGTCCTGCACCACATGGCTAA 135615 Query 64012 ATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCAT 64071 | | || || || |||||||| || || ||||| |||| || || || | |||| Sbjct 135614 AGTGCTTCTTGGTCTCCTTGTGCAGGTTGCTGATGGCAATTCGTGCCGCCAGCACAGCAT 135555 Query 64072 AATCCGGAT-----GTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAA 64126 | || || | || || | |||| || || | || || || || |||| | Sbjct 135554 AGTCAGGGTGGGTGGTCGTCTTGTAC-----GCCGCAGTCTCAGCCGCGAGGTTGTCAAG 135500 Query 64127 TTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGG 64186 ||||| || || || |||| || || || | ||| ||||| | || | || || Sbjct 135499 CTCTACGGTGGTCACACCATCGTAGATACCATCAATCACCTTACGCGTGATCTCGATGGG 135440 Query 64187 ATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCTAATACGAGACGTGATTTTATC 64246 ||| |||| | | ||| | || ||||| | |||| | ||| | || | ||||| Sbjct 135439 ATCGATATAGTTCATGTCGAGCCCGTAGCAGAGTTTTGCCACACGGGCAGTCACCTTATC 135380 Query 64247 AAACATGACATTTTCCTTG 64265 || ||| | ||||||| Sbjct 135379 GAAGCGGACCTCTTCCTTG 135361 Score = 95.1 bits (104), Expect = 2e-14 Identities = 258/391 (66%), Gaps = 13/391 (3%) Strand=Plus/Plus Query 33564 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623 ||||| | |||| | || || || ||| ||||||||||||||| | || | Sbjct 123793 AAATGGCTGAACAAGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGC 123852 Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 || || || |||| || |||||||| || |||||||| || ||||| || || || ||| Sbjct 123853 TCATTGGAGAACGAAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCG 123912 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743 || || || || || ||||| || || || || |||||||| | || | ||| | | || Sbjct 123913 AACGAGCCAGAGAAAAAGATACCCTCAACAGCGGCAAAGGCCACCAGGCGCTC-CGAGAA 123971 Query 33744 C-CGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 | ||||| |||| ||||| | ||||| |||||||||| || || || Sbjct 123972 CGAGGCGCGCTTGTCCGAGATCCAACGCAGCGCCCACTCGGCCTTCTGCTTGACGACGGG 124031 Query 33800 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAG 33855 || || || ||||| || || || || || | | || || | || | Sbjct 124032 GATGGTCTCGATGGCGTTGAAAAGGTA----TTCGCGCTGCTCTGGCTCGCGGATGTAGG 124087 Query 33856 TATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 33915 | ||||| | || || | ||||| |||||||| || || ||||| || |||| Sbjct 124088 TGTCGATGAGGAGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCATGATCTGGAAGCCGT 124147 Query 33916 AGAAACATCTAGCCTCGGTAATCTGCACTTC 33946 |||| || | |||||||| |||||| || Sbjct 124148 AGAAGCAGCGAGCCTCGGCGGCCTGCACCTC 124178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816678891760