Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq74 113 6e-20 >seq74 Length=174556 Score = 113 bits (124), Expect = 6e-20 Identities = 428/669 (64%), Gaps = 2/669 (0%) Strand=Plus/Minus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||| | |||||| || |||| | || || || ||| || || ||||||||| Sbjct 136392 GGGCACATAAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAGGTCAGGAATC 136333 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || || || | || | || | | | ||||| || || ||||| || Sbjct 136332 CACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCGTGGTTCTTGCGCAGG 136273 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 || | |||| | | | || | |||||||| || | ||| || || | |||| || Sbjct 136272 TCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATCGCAAAGGCTCCGGGG 136213 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 136212 CGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCAGTGTTGTTGTACACGCGGAGCATCGGC 136153 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326 | |||||| ||| ||| || || || | || ||| || | |||||||| || Sbjct 136152 ACAATACCGTTGCTGACACCGTTCGTGCCAGCAATGTAGGAGCCTGTGGCACGAATGTTG 136093 Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 66386 || ||||| || || || ||| | || ||| | ||||| || | ||| Sbjct 136092 TGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGATCATAGCGCAGGTCTTGAGCGTG 136033 Query 66387 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 66446 || || || ||||| || || ||| |||| | | || || ||| ||||||||| Sbjct 136032 TCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCACAAGGAAGCAGGACGACATTTGG 135973 Query 66447 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 66506 | | || || || || || | ||| || || |||||||| || || || || Sbjct 135972 GGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGTGCGTGAAGGCCTTCTCGGAC 135913 Query 66507 A-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 66565 | |||| ||||| ||||| || || | | |||| || || ||||| || || Sbjct 135912 ATGTAG-TTGTAGGTCTCGATGGCGCTCTTCACATCCTCGCCGTGGATGCCTACAGCAAC 135854 Query 66566 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 66625 |||||| | |||||||||||| | || ||| |||| ||| || || | |||||| Sbjct 135853 ACGCATGAGCATGTGCTGAGGGCGCTCCGCGACCTTGCCGTTGATGCGCAGGAGGTAGGA 135794 Query 66626 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 66685 || | || || || || || ||||||| |||||| || |||||||| | | Sbjct 135793 GCGCTCAAGCGTCTTGAAGCCGAAGAAGTTGTAGTGAAAGTCGCGCTCGTAAATCACCGC 135734 Query 66686 CGAGTTGAG 66694 ||||| ||| Sbjct 135733 CGAGTCGAG 135725 Score = 86.0 bits (94), Expect = 8e-12 Identities = 181/267 (68%), Gaps = 5/267 (2%) Strand=Plus/Plus Query 36140 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 36199 ||||| | |||| | || || || ||| ||| ||||||||||| | || | Sbjct 123793 AAATGGCTGAACAAGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGC 123852 Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259 || ||||| |||| || |||||||| || |||||||| || ||||| || || || || Sbjct 123853 TCATTGGAGAACGAAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCG 123912 Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 36319 || || ||||| || || || || || || || |||||||| | || | ||| | | || Sbjct 123913 AACGAGCCAGAGAAAAAGATACCCTCAACAGCGGCAAAGGCCACCAGGCGCTC-CGAGAA 123971 Query 36320 C-CGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 36375 | ||| | |||| ||||| | ||||| |||||||||| || || || Sbjct 123972 CGAGGCGCGCTTGTCCGAGATCCAACGCAGCGCCCACTCGGCCTTCTGCTTGACGACGGG 124031 Query 36376 CATTGTCTCTATAGCATTAAAGAGATA 36402 || ||||| || || || || || || Sbjct 124032 GATGGTCTCGATGGCGTTGAAAAGGTA 124058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171837422280