Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq74 127 3e-24 >seq74 Length=174556 Score = 127 bits (140), Expect = 3e-24 Identities = 440/684 (64%), Gaps = 2/684 (0%) Strand=Plus/Minus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 || || || ||| |||| ||||| | |||||| || || | | || || || ||| Sbjct 136407 CCCGGGCACTCGGCAGGGCACATAAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATG 136348 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || || ||||||||||| || || | || || || | | | |||||| || || Sbjct 136347 AACAGGTCAGGAATCCACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCG 136288 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| || || | |||| | | | || || |||||||| || | ||| || Sbjct 136287 TGGTTCTTGCGCAGGTCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATC 136228 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | |||| || || ||||| || ||||| || | ||| | || ||||| || || Sbjct 136227 GCAAAGGCTCCGGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCAGTGTTGTTGTAC 136168 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | | ||| || | |||||| ||| ||| || || || | || ||| || Sbjct 136167 ACGCGGAGCATCGGCACAATACCGTTGCTGACACCGTTCGTGCCAGCAATGTAGGAGCCT 136108 Query 80191 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250 |||||||||| || || ||||| || || || ||| | || ||| | ||| Sbjct 136107 GTGGCACGAATGTTGTGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGATCATAGCG 136048 Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAA 80310 || || | ||| || || || ||||| || || || |||| | | || || Sbjct 136047 CAGGTCTTGAGCGTGTCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCACAAGGAAG 135988 Query 80311 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 80370 ||| ||||||||| | | || || || || || | ||| || || |||||||| Sbjct 135987 CAGGACGACATTTGGGGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGTGCGTG 135928 Query 80371 AACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 80429 || || || |||| |||| ||||| ||||| || || | | |||| || Sbjct 135927 AAGGCCTTCTCGGACATGTAG-TTGTAGGTCTCGATGGCGCTCTTCACATCCTCGCCGTG 135869 Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489 || ||||| || |||||||| | |||||||||||| | || ||| |||| || || Sbjct 135868 GATGCCTACAGCAACACGCATGAGCATGTGCTGAGGGCGCTCCGCGACCTTGCCGTTGAT 135809 Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549 || | ||| || || | || || || || || ||||||| |||||| || Sbjct 135808 GCGCAGGAGGTAGGAGCGCTCAAGCGTCTTGAAGCCGAAGAAGTTGTAGTGAAAGTCGCG 135749 Query 80550 TTCGTAAATAATAACCGAGTTGAG 80573 |||||||| | |||||| ||| Sbjct 135748 CTCGTAAATCACCGCCGAGTCGAG 135725 Score = 114 bits (126), Expect = 2e-20 Identities = 395/610 (65%), Gaps = 16/610 (3%) Strand=Plus/Plus Query 49942 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 50001 ||||| | |||| | || || || ||| ||||||||||||||| | || || Sbjct 123793 AAATGGCTGAACAAGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGC 123852 Query 50002 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 50061 || ||||| |||| || |||||||| || |||||||| || ||||| || || || || Sbjct 123853 TCATTGGAGAACGAAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCG 123912 Query 50062 AATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAA 50121 || || ||||| || ||||| || || || ||||||||||| || || | ||| | | || Sbjct 123913 AACGAGCCAGAGAAAAAGATACCCTCAACAGCGGCAAAGGCCACCAGGCGCTC-CGAGAA 123971 Query 50122 C-TGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 | ||||| |||| ||||| | ||||| |||||||||| || || || Sbjct 123972 CGAGGCGCGCTTGTCCGAGATCCAACGCAGCGCCCACTCGGCCTTCTGCTTGACGACGGG 124031 Query 50178 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAG 50233 || || || ||||| || || || || || | | || || | || | Sbjct 124032 GATGGTCTCGATGGCGTTGAAAAGGTA----TTCGCGCTGCTCTGGCTCGCGGATGTAGG 124087 Query 50234 TATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 50293 | ||||| | || || | ||||| |||||||| || || ||||| || |||| Sbjct 124088 TGTCGATGAGGAGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCATGATCTGGAAGCCGT 124147 Query 50294 AGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCAT 50353 |||| || | |||||||| |||||| || | | || || || | | || || | Sbjct 124148 AGAAGCAGCGAGCCTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCCACCAGGTTCTCGT 124207 Query 50354 TCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGT 50413 | || || ||||| || || || || |||| || || | | ||| || || | Sbjct 124208 TGACGATACCGTCCGAAGCAGCGAAGAAAGCCAGGACGTGGCTCACAAAGTGACGCTCAT 124267 Query 50414 TG-GGT--GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTG 50470 || || | | | | ||| || | | || || || | || | || || | | Sbjct 124268 TGTCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGACAGGTCCATCTCCTCGGCGG 124327 Query 50471 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGA 50530 |||| || || ||||| ||||| || ||||| | ||| || || || || | || |||| Sbjct 124328 TCCAGAACGAGGCCTCCGCCTTCTTGTACATCTGCCAAATCTCGTGGTAGCGAATGGGGA 124387 Query 50531 AAATAACAAA 50540 | | ||||| Sbjct 124388 AGAGCACAAA 124397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267749531880