Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq74 120 4e-22 >seq74 Length=174556 Score = 120 bits (132), Expect = 4e-22 Identities = 396/613 (65%), Gaps = 2/613 (0%) Strand=Plus/Minus Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089 ||| || || ||||||||||| || || | || || || | | | |||||| || Sbjct 136351 CATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTT 136292 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 || ||||| || || | |||| | | | || || |||||||| || | ||| Sbjct 136291 ACCGTGGTTCTTGCGCAGGTCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTA 136232 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 || || | |||| || || ||||| || ||||| || | ||| | || ||||| || Sbjct 136231 GATCGCAAAGGCTCCGGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCAGTGTTGTT 136172 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 || || | | ||| || | |||||| ||| |||| || || || | || ||| Sbjct 136171 GTACACGCGGAGCATCGGCACAATACCGTTGCTGACACCGTTCGTGCCAGCAATGTAGGA 136112 Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 || |||||||||| ||| || ||||| || || || ||| | || ||| | Sbjct 136111 GCCTGTGGCACGAATGTTGTGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGATCAT 136052 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 ||||| || | ||| || || || ||||| || || ||| |||| | | || Sbjct 136051 AGCGCAGGTCTTGAGCGTGTCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCACAAG 135992 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 || ||| ||||||||| | | || || || || || | ||| || || ||||| Sbjct 135991 GAAGCAGGACGACATTTGGGGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGTG 135932 Query 72450 CGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 72508 ||| || || || |||| |||| ||||| ||||| || || | | |||| Sbjct 135931 CGTGAAGGCCTTCTCGGACATGTAG-TTGTAGGTCTCGATGGCGCTCTTCACATCCTCGC 135873 Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTAT 72568 || || ||||| || |||||||| | ||| |||||||| | || ||| |||| | Sbjct 135872 CGTGGATGCCTACAGCAACACGCATGAGCATGTGCTGAGGGCGCTCCGCGACCTTGCCGT 135813 Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 72628 | || || | |||||| || | || || || || || ||||||| ||||| Sbjct 135812 TGATGCGCAGGAGGTAGGAGCGCTCAAGCGTCTTGAAGCCGAAGAAGTTGTAGTGAAAGT 135753 Query 72629 CTCGTTCGTAAAT 72641 | || |||||||| Sbjct 135752 CGCGCTCGTAAAT 135740 Score = 89.7 bits (98), Expect = 7e-13 Identities = 182/267 (68%), Gaps = 5/267 (2%) Strand=Plus/Plus Query 42047 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAAT 42106 ||||| | |||| | || || || ||| |||||||||||| || | || | Sbjct 123793 AAATGGCTGAACAAGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGC 123852 Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 || ||||| |||| || |||||||| || |||||||| || ||||| || || || || Sbjct 123853 TCATTGGAGAACGAAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCG 123912 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 42226 || || ||||| || ||||| || || || || |||||||| | || | ||| | | || Sbjct 123913 AACGAGCCAGAGAAAAAGATACCCTCAACAGCGGCAAAGGCCACCAGGCGCTC-CGAGAA 123971 Query 42227 C-CGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282 | ||| | |||| ||||| | ||||| |||||||||| || || || Sbjct 123972 CGAGGCGCGCTTGTCCGAGATCCAACGCAGCGCCCACTCGGCCTTCTGCTTGACGACGGG 124031 Query 42283 CATCGTTTCTATGGCATTAAAGAGATA 42309 || || || ||||| || || || || Sbjct 124032 GATGGTCTCGATGGCGTTGAAAAGGTA 124058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138218458920