Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq74 259 7e-64 >seq74 Length=174556 Score = 259 bits (286), Expect = 7e-64 Identities = 585/867 (67%), Gaps = 27/867 (3%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 || || ||||| | || || || |||||| | |||||||| ||||| ||||||| || Sbjct 124391 CTCTTCCCCATTCGCTACCACGAGATTTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTC 124332 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||| | ||| ||| | || ||||| |||||| || |||| ||||| || ||| Sbjct 124331 TGGACCGCCGAGGAGATGGACCTGTCGAAGGACTTGCACGACTGGGACCACCGCATGAAC 124272 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | |||||| | ||| | ||| | |||| ||||| || | || || || ||| Sbjct 124271 GACAATGAGCGTCACTTTGTGAGCCACGTCCTGGCTTTCTTCGCTGCTTCGGACGGTATC 124212 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCG- 125231 |||||||| || ||| || || ||| ||| || || || |||| ||| Sbjct 124211 GTCAACGAGAACCTGGTGGAGCGCTTCAGCGCCGAGGTG--CAGGCCGCCGAGGC-TCGC 124155 Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291 ||||| ||||| ||||| |||||||| |||||| | |||||||| | ||||| || Sbjct 124154 TGCTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCGGAGACCTACTCGCTCCTC 124095 Query 125292 ATTGACATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGAC 125348 || |||| ||||| ||||| || ||| || || || || || ||||| ||||| Sbjct 124094 ATCGACACCTACATCCGCGAGCCAGAGCAGCGCGAATAC---CTTTTCAACGCCATCGAG 124038 Query 125349 ACGGTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 || | || ||| | | | || ||| | |||| | | || |||||| ||| | Sbjct 124037 ACCATCCCCGTCGTCAAGCAGAA-GGCCGAGTGGGCGCTGCGTTGGATCTCGGACAAGCG 123979 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | |||| | | || | |||||||| || ||||| || ||||| ||||| || || || Sbjct 123978 CGCCTCGTTCTCGGAGCGCCTGGTGGCCTTTGCCGCTGTTGAGGGTATCTTTTTCTCTGG 123919 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 || || | ||||| |||||||||||||| || ||||||||||| || || | Sbjct 123918 CTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTTTCGTTCTC 123859 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587 || ||| | || || || |||||||| || ||| ||||||||| || |||| Sbjct 123858 CAATGAGCTCATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTCTTGTT--- 123802 Query 125588 CAACTATCTG-CGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCG 125646 || | || || | || | ||| | ||| | ||| | | |||| | |||| Sbjct 123801 CAGCCATTTGAAGAAGCGCGCGCA-------CCCTGACACGGTGAACCGCATTATCACCG 123749 Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706 | |||||| || || || || ||| | ||||| | || || ||| |||| || | Sbjct 123748 AGGCCGTGGCCATTGAGCAGGACTTTTTGACCGATGCTCTGCCTGTCTCGCTGATCGGTA 123689 Query 125707 TGAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG 125765 ||||| || | || |||||| ||||||| ||||||||||| || || || || | | Sbjct 123688 TGAAC-GCTCGCCTGATGTGCCAGTACATTGAGTTTGTGGCCGACCGCCTGCTCGTCAAC 123630 Query 125766 TTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA 125825 || || |||| |||||| | | ||| |||||||| || ||| | ||| || Sbjct 123629 CTGGGCAACCCCAAGCACTACAACTCGACGAACCCCTTTGACTTTATGGAGAACATTTCG 123570 Query 125826 CTAGAGGGTAAGACCAACTTTTTCGAG 125852 || |||| ||| | |||||||||||| Sbjct 123569 CTCCAGGGCAAGTCGAACTTTTTCGAG 123543 Score = 179 bits (198), Expect = 5e-40 Identities = 363/531 (68%), Gaps = 6/531 (1%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGGCAATAA 96889 ||||| |||||| | ||||||| || || | || ||||| ||||||||||| || Sbjct 136151 GTGCCGATGCTCCGCGTGTACAACAACACTG-CGCGCTACGTGGACCAGGGCGGCAACAA 136209 Query 96890 ACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTAT 96949 || || || || | || ||||| | || || |||||| ||||||| ||||| || || Sbjct 136210 GCGCCCCGGAGCCTTTGCGATCTACCTCGAGCCGTGGCACTCGGACGTGTTTGAGTTCAT 136269 Query 96950 CGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACT 97009 || ||||||| ||| || || |||| || || | ||| |||| || || Sbjct 136270 TGACCTGCGCAAGAACCACGGTAAGGAGGAGGTGCGTGCGCGCGACCTGTTCCTGGCCCT 136329 Query 97010 CTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTG 97069 ||| | || || |||||||| |||||| | | ||| ||||| || ||||| Sbjct 136330 GTGGATTCCTGACCTGTTCATGCGCCGCGTCGAGCAGAACGGCGACTGGTCGCTTATGTG 136389 Query 97070 CCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACAC 97129 ||| | | || || || ||| | || |||| ||||| |||||||| ||| |||| Sbjct 136390 CCCTGCCGAGTGCCCGGGCCTGGCTGACTGCTACGGCGAGGAGTTTGATGCCTTGTACGA 136449 Query 97130 GGCCTACGAGCAAGAGGGCCGATACG-TGAGACGAGTCGATGCACGAGAA-CTGTGGAAG 97187 ||||||| |||||||| | || | | ||| | || | |||| || ||| | Sbjct 136450 AAAGTACGAGCGCGAGGGCCG-TGCGAAGCGCTCCGTCAAGGCGC-AGAAGCTCTGGTAC 136507 Query 97188 GCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTG 97247 ||||| || ||| ||| | ||||| || | ||| | ||| || |||||||| | | Sbjct 136508 GCCATTTTGGAGGCCCAGATCGAGACCGGCAATCCCTTCATCCTGTACAAGGACTCGGCC 136567 Query 97248 AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAA 97307 || ||||| |||||||| || | ||||| |||||| |||| || ||||| || ||| Sbjct 136568 AACCGCAAGAGCAACCAGAAGAACCTCGGCACGATCAAGAGCTCGAACCTGTGTACCGAA 136627 Query 97308 ATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCG 97358 || | || ||| ||| ||||||||||| || || ||| ||||| ||| Sbjct 136628 ATCATCGAATACAGCTCGCCGGACGAGACTGCCGTGTGCAACCTGGCCTCG 136678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058116200920