Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq74 136 5e-27 >seq74 Length=174556 Score = 136 bits (150), Expect = 5e-27 Identities = 433/669 (65%), Gaps = 2/669 (0%) Strand=Plus/Minus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 || ||||| | |||||| || |||| | || || || ||| || || ||||||||| Sbjct 136392 GGGCACATAAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAGGTCAGGAATC 136333 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302 || || || | || || || | | | ||||| || || ||||| || Sbjct 136332 CACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCGTGGTTCTTGCGCAGG 136273 Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362 || | |||| | | | || || |||||||| || | ||| || || | |||| || Sbjct 136272 TCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATCGCAAAGGCTCCGGGG 136213 Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 136212 CGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCAGTGTTGTTGTACACGCGGAGCATCGGC 136153 Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA 63482 | ||||||||| | ||| || || || | || ||| || |||||||||| || Sbjct 136152 ACAATACCGTTGCTGACACCGTTCGTGCCAGCAATGTAGGAGCCTGTGGCACGAATGTTG 136093 Query 63483 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63542 || ||||| || || || ||| | || ||| | ||||| || | |||| Sbjct 136092 TGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGATCATAGCGCAGGTCTTGAGCGTG 136033 Query 63543 TCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63602 || || |||||||| || || || |||| | | || || ||| ||||||||| Sbjct 136032 TCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCACAAGGAAGCAGGACGACATTTGG 135973 Query 63603 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63662 | | || || || || || | ||| || || |||||||| || || || || Sbjct 135972 GGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGTGCGTGAAGGCCTTCTCGGAC 135913 Query 63663 A-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 63721 | |||| ||||| ||||| || || | | |||| || || ||||| || || Sbjct 135912 ATGTAG-TTGTAGGTCTCGATGGCGCTCTTCACATCCTCGCCGTGGATGCCTACAGCAAC 135854 Query 63722 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63781 |||||| | |||||||||||| | || ||| |||| ||| || || | |||||| Sbjct 135853 ACGCATGAGCATGTGCTGAGGGCGCTCCGCGACCTTGCCGTTGATGCGCAGGAGGTAGGA 135794 Query 63782 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63841 || | || || || || || ||||||| |||||| || |||||||| | | Sbjct 135793 GCGCTCAAGCGTCTTGAAGCCGAAGAAGTTGTAGTGAAAGTCGCGCTCGTAAATCACCGC 135734 Query 63842 CGAGTTGAG 63850 ||||| ||| Sbjct 135733 CGAGTCGAG 135725 Score = 113 bits (124), Expect = 6e-20 Identities = 287/433 (66%), Gaps = 13/433 (3%) Strand=Plus/Plus Query 33286 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 33345 ||||| | |||| | || || || ||| ||||||||||||||| | || || Sbjct 123793 AAATGGCTGAACAAGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGC 123852 Query 33346 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33405 || ||||| |||| || |||||||| || |||||||| || ||||| || || || ||| Sbjct 123853 TCATTGGAGAACGAAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCG 123912 Query 33406 AATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33465 || || ||||| || ||||| || || || || |||||||| | || | ||| | | || Sbjct 123913 AACGAGCCAGAGAAAAAGATACCCTCAACAGCGGCAAAGGCCACCAGGCGCTC-CGAGAA 123971 Query 33466 C-CGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521 | ||||| |||| ||||| | ||||| |||||||||| || || || Sbjct 123972 CGAGGCGCGCTTGTCCGAGATCCAACGCAGCGCCCACTCGGCCTTCTGCTTGACGACGGG 124031 Query 33522 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAG 33577 || || || ||||| || || || || || | | || || | || | Sbjct 124032 GATGGTCTCGATGGCGTTGAAAAGGTA----TTCGCGCTGCTCTGGCTCGCGGATGTAGG 124087 Query 33578 TATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 33637 | ||||| | || || | ||||| |||||||| || || ||||| || |||| Sbjct 124088 TGTCGATGAGGAGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCATGATCTGGAAGCCGT 124147 Query 33638 AGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCAT 33697 |||| || | |||||||| ||| || || | | || || ||| ||| || || | Sbjct 124148 AGAAGCAGCGAGCCTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCCACCAGGTTCTCGT 124207 Query 33698 TCACTATTCCGTC 33710 | || || ||||| Sbjct 124208 TGACGATACCGTC 124220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946288939720