Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq74 304 3e-77 >seq74 Length=174556 Score = 304 bits (336), Expect = 3e-77 Identities = 635/937 (68%), Gaps = 32/937 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | |||||| | ||| |||||||| || ||||| || | | | || Sbjct 135770 TTCGGCTTCAAGACGCTTGAGCGCTCCTACCTCCTGCGCATCAACGGCAAGGTCGCGGAG 135829 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 ||||| ||||| ||| | |||||||||||| | || ||||| || |||||| | | Sbjct 135830 CGCCCTCAGCACATGCTCATGCGTGTTGCTGTAGGCATCCACGGCGAGGATGTGAAGAGC 135889 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA----TTCACGCACGCCACGCCAAC 363566 || || || || || || ||| || || | | ||||||||||| |||| || Sbjct 135890 GCCATCGAGACCTACAA----CTACATGTCCGAGAAGGCCTTCACGCACGCGTCGCCGAC 135945 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 ||| ||| ||||| || | ||| || || ||||| || ||||| ||| | | ||||| Sbjct 135946 CCTGTTCAACGCTGGTACGCCTAACCCCCAAATGTCGTCCTGCTTCCTTGTGAGTATGAA 136005 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 |||||| || || |||||||| | ||||| || |||| || ||| | || ||||| Sbjct 136006 GGACGACTCGATTGAGGGTATTTACGACACGCTCAAGACCTGCGCTATGATCAGCAAGAC 136065 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACATTCGCG 363745 || ||||| || ||| | |||||||| |||||| ||||| | |||||| | Sbjct 136066 GGCTGGCGGTATCGGTCTGAACATCCACAACATTCGTGCCACAG-GCTCCTACATTGCTG 136124 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 |||| || | || || | || || ||||| || |||| |||| |||||| Sbjct 136125 GCACGAACGGTGTCAGCAACGGTATTGTGCCGATGCTCCGCGTGTACAACAACACTGCGC 136184 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | ||||| |||||||| || |||||| || || ||||| || || |||||||| Sbjct 136185 GCTACGTGGACCAGGGCGGCAACAAGCGCCCCGGAGCCTTTGCGATCTACCTCGAGCCGT 136244 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || | || | |||||||| |||| || || || ||| || || ||||| ||| Sbjct 136245 GGCACTCGGACGTGTTTGAGTTCATTGACCTGCGCAAGAACCACGGTAAGGAGGAGGTGC 136304 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 |||| || || |||||| || || ||| || |||||| || ||| ||||| || | Sbjct 136305 GTGCGCGCGACCTGTTCCTGGCCCTGTGGATTCCTGACCTGTTCATGCGCCGCGTCGA-G 136363 Query 363986 CAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 ||| | | ||||| || | ||||| ||| || || || || | || | Sbjct 136364 CAGAACGGCGACTGGTCGCTTATGTGCCCTGCCGAGTGCCCGGGCCTGGCTGACTGCTAC 136423 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGG-------GAAAGGCTCG 364097 || || || | || ||| | ||||||||||| || |||| ||| |||| Sbjct 136424 GGCGAGGAGTTTGATGCCTTGTACGAAAAGTACGAGCGCGAGGGCCGTGCGAAGCGCTC- 136482 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 | ||| || |||||||| |||| ||||| |||| | ||||| ||||| || Sbjct 136483 --CGTCAA----GGCGCAGAAGCTCTGGTACGCCATTTTGGAGGCCCAGATCGAGACCGG 136536 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 | |||| || ||||||| || ||| |||||||||| ||||||| || |||| || Sbjct 136537 CAATCCCTTCATCCTGTACAAGGACTCGGCCAACCGCAAGAGCAACCAGAAGAACCTCGG 136596 Query 364218 TACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGA 364274 || | ||| ||||| ||||| |||||||| || || ||||||| | | || ||||| Sbjct 136597 CACGA-TCA--AGAGCTCGAACCTGTGTACCGAAATCATCGAATACAGCTCGCCGGACGA 136653 Query 364275 GACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 ||||||||| || ||||| || ||||| ||| | ||| Sbjct 136654 GACTGCCGTGTGCAACCTGGCCTCGATTGCGTTGCCG 136690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351646191494