Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq74 127 3e-24 >seq74 Length=174556 Score = 127 bits (140), Expect = 3e-24 Identities = 611/964 (63%), Gaps = 18/964 (2%) Strand=Plus/Minus Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 |||| || || || || | || ||||| | |||||| || |||| | || || || Sbjct 136412 CCAGGCCCGGGCACTCGGCAGGGCACATAAGCGACCAGTCGCCGTTCTGCTCGACGCGGC 136353 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 ||| || || ||||||||||| || || | || || || | | | ||||| | Sbjct 136352 GCATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCT 136293 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || ||||| || || | |||| | | | || || |||||||| || | || Sbjct 136292 TACCGTGGTTCTTGCGCAGGTCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGT 136233 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | || || | |||| || || ||||| || ||||| || | ||| | || ||||| | Sbjct 136232 AGATCGCAAAGGCTCCGGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCAGTGTTGT 136173 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | || || | | ||| || | |||||| ||| ||| || || || | || ||| Sbjct 136172 TGTACACGCGGAGCATCGGCACAATACCGTTGCTGACACCGTTCGTGCCAGCAATGTAGG 136113 Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || |||||||||| || || ||||| || || || ||| | || ||| | Sbjct 136112 AGCCTGTGGCACGAATGTTGTGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGATCA 136053 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 ||||| || | ||| || || || ||||| || || ||| |||| | | | Sbjct 136052 TAGCGCAGGTCTTGAGCGTGTCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCACAA 135993 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || ||| ||||||||| | | || || || || || | ||| || || |||| Sbjct 135992 GGAAGCAGGACGACATTTGGGGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGT 135933 Query 63498 GAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556 | || || || || || | |||| ||||| ||||| || || | | |||| Sbjct 135932 GCGTGAAGGCCTTCTCGGACATGTAG-TTGTAGGTCTCGATGGCGCTCTTCACATCCTCG 135874 Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616 || || ||||| || |||||||| | |||||||||||| | || ||| |||| | Sbjct 135873 CCGTGGATGCCTACAGCAACACGCATGAGCATGTGCTGAGGGCGCTCCGCGACCTTGCCG 135814 Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676 || || || | |||||| || | || || || || || ||||||| |||| Sbjct 135813 TTGATGCGCAGGAGGTAGGAGCGCTCAAGCGTCTTGAAGCCGAAGAAGTTGTAGTGAAAG 135754 Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 63736 || || |||||||| | |||||| ||| | || | || | || | || Sbjct 135753 TCGCGCTCGTAAATCACCGCCGAGTCGAGCGTGTCGCGGTTCTTCATCACCGCCTCGTAC 135694 Query 63737 GTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAA 63795 || | ||| || || ||||| ||||||| | || || || || |||| | | | Sbjct 135693 GT-CTCCTTGGAGATCATAGGGCTATGTTTCTTCGTCTTGGGGTTCACGTAGTCGTACAG 135635 Query 63796 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGATACGGCT 63853 |||| || ||| | ||||| | || || || || ||||| || || |||| ||| Sbjct 135634 GTCCTGCACCACATGGCTAAAGTGCTTCTTGGTCTCCTTGTGCAGGTTGCTGAT--GGCA 135577 Query 63854 ATTCTAGCGGCTAGAATGGCATAATCCGGAT-----GTTGTGTAGTACAAGTGGCTGCTA 63908 |||| || || || | ||||| || || | || || | |||| || || Sbjct 135576 ATTCGTGCCGCCAGCACAGCATAGTCAGGGTGGGTGGTCGTCTTGTAC-----GCCGCAG 135522 Query 63909 TTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAA 63968 | || || || || |||| | ||||| || || ||||||| || || || | || | Sbjct 135521 TCTCAGCCGCGAGGTTGTCAAGCTCTACGGTGGTCACACCATCGTAGATACCATCAATCA 135462 Query 63969 CCTT 63972 |||| Sbjct 135461 CCTT 135458 Score = 89.7 bits (98), Expect = 7e-13 Identities = 182/267 (68%), Gaps = 5/267 (2%) Strand=Plus/Plus Query 32643 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 32702 ||||| | |||| | || || || ||| ||| ||||||||||| | || | Sbjct 123793 AAATGGCTGAACAAGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGC 123852 Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762 || ||||| |||| || |||||||| || |||||||| || ||||| || || || || Sbjct 123853 TCATTGGAGAACGAAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCG 123912 Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 32822 || || ||||| || || || || || || || |||||||| | || | ||| | | || Sbjct 123913 AACGAGCCAGAGAAAAAGATACCCTCAACAGCGGCAAAGGCCACCAGGCGCTC-CGAGAA 123971 Query 32823 C-CGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 32878 | ||||| |||| ||||| | ||||| |||||||||| || || || Sbjct 123972 CGAGGCGCGCTTGTCCGAGATCCAACGCAGCGCCCACTCGGCCTTCTGCTTGACGACGGG 124031 Query 32879 CATTGTCTCTATAGCATTAAAGAGATA 32905 || ||||| || || || || || || Sbjct 124032 GATGGTCTCGATGGCGTTGAAAAGGTA 124058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631073313200