Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq106 104 2e-17 seq111 102 7e-17 >seq106 Length=438498 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||| | || || ||||| | ||||| || | || || |||| |||||||| Sbjct 198076 ACCATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATTACCCTCGAGGTGGAGTCT 198017 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| |||||| | ||| || ||| ||||| || || || || || ||| Sbjct 198016 TCCGACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGAC 197957 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || || ||||| || | || |||| ||||||| || |||| ||| Sbjct 197956 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTAC 197897 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || |||||| || | ||||| Sbjct 197896 AACATCCAGAAGGAGAGCACGCTCCACCTTGTGCT 197862 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||| ||||||||||| || ||||| ||||| | |||||||| || || || | ||| Sbjct 106664 GACAAGGAAGGGATTCCCCCGGACCAGCAGCGCCTGATTTTTGCTGGTAAGCAGCTGGAA 106723 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| |||||| | |||| |||||||| ||||| || ||| || ||| | ||||| Sbjct 106724 GATGGACGCACTCTAAGCGACTACAATATCCAAAAGGAGAGCACACTGCATCTCGTGCT 106782 >seq111 Length=547826 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| |||| || || | ||||| | || || ||||| || Sbjct 165717 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 165776 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || ||||| || |||| Sbjct 165777 GACACGATCGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 165834 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || |||||||| || | || || | |||||| | |||| |||| Sbjct 165835 AACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCAGCGACTACA 165894 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| || || ||| || || | ||||| Sbjct 165895 ACATTCAGAAGGAGAGCACCCTGCACCTCGTGCT 165928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327382101355