Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq111 111 1e-19 seq106 84.2 2e-11 >seq111 Length=547826 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || ||| |||| ||||| || || || | Sbjct 165717 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 165776 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| ||||| || || ||| Sbjct 165777 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 165836 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| |||||| || ||| |||||| Sbjct 165837 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCAGCGACTACAAC 165896 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 165897 ATTCAGAAGGA 165907 >seq106 Length=438498 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | ||||| || ||| | || || || ||||| | || Sbjct 198073 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATTACCCTCGAGGTGGAGTCTTCC 198014 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || || |||||||||||||| || || || ||| Sbjct 198013 GACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 197954 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | |||||| ||||| | ||| |||||| Sbjct 197953 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAAC 197894 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 197893 ATCCAGAAGGA 197883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727401494105