Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq74 147 4e-30 seq75 111 3e-19 seq48 91.5 3e-13 >seq74 Length=174556 Score = 147 bits (162), Expect = 4e-30 Identities = 301/442 (68%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 || ||||| ||||| || || |||||||||| || || || |||||| ||||| ||| Sbjct 123535 ACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAAATGTTCTCCATAAAGTCAAAG 123594 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| || | ||||| |||||||| | ||| || |||| | |||||| |||||| Sbjct 123595 GGGTTCGTCGAGTTGTAGTGCTTGGGGTTGCCCAGGTTGACGAGCAGGCGGTCGGCCACA 123654 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | |||||| || |||||| || |||| ||| | ||| | || Sbjct 123655 AACTCAATGTACTGGCACATCAGGCGAGCGTTCATACCGATCA-GCGAGACAGGCAGAGC 123713 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 || | || |||| || |||| || ||||| | ||| |||||| ||| Sbjct 123714 ATCGGTCAAAAAGTCCTGCTCAATGGCCACGGCCTCGGTGATAATGCGGTTCACC-GTGT 123772 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGAC 251851 ||| | || | |||| || | | ||| ||| | |||| | |||||||| Sbjct 123773 CAGGGTGCGCGCGCTTCTTCAAATGGCTGAACAAGAGGCAGGCAAAGTCGGTGTGCAGAC 123832 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 ||||||| || ||||| ||| ||||| | || || ||||| | ||||| ||| Sbjct 123833 CCTCGTCACGCGAGATGAGCTCATTGGAGAACGAAAGACCGGGCATGAGACCACGCTTCT 123892 Query 251912 TGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG 251971 ||||||||||||| | | || || |||||||| | | |||||| ||| | | | Sbjct 123893 TGAGCCAGAAGATCGAGGCGAACGAGCCAGAGAAAAAGATACCCTCAACAGCGGCAAAGG 123952 Query 251972 CAACAAGGCGCTCAGCAAACGA 251993 | || |||||||| | ||||| Sbjct 123953 CCACCAGGCGCTCCGAGAACGA 123974 Score = 91.5 bits (100), Expect = 3e-13 Identities = 228/340 (67%), Gaps = 10/340 (3%) Strand=Plus/Minus Query 293032 GTTTTAAGACCCTTCTTCCATGCGTAGAACAGCATAGATGTCA-TAGACTTCAGTGTGGG 293090 || || || ||||||||||| |||| || |||| || || | ||| || || || Sbjct 137544 GTCTTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAAAG-GTCGG 137486 Query 293091 AGTGGCCAGGAAAAGGTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCAGC 293150 | | |||| || ||| | ||||| |||| ||||| || ||||| || || || Sbjct 137485 CGCGCTCAGGTGAATGTTGAGACTCTGGCTCTGGCACACAAACGCGCCACGGTCCGCCGC 137426 Query 293151 GAGGTCA---ATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGAC 293207 | |||| ||||| | | || ||||||||| |||||||| | ||||||| Sbjct 137425 CATGTCAATGATCACCTTTTGGCTA---ATCTCCCACACGGTCTTGTAAAGCGCCTTGAT 137369 Query 293208 ATCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTT 293267 | | | |||||| || || ||||| || || || | |||||||||| | ||| Sbjct 137368 GTGGTCAGGGATGCCAGCCACGTTTTGGATCGAGCCGCCATGCGCAATAATCTTTTGCTT 137309 Query 293268 CATTGTCTCGGACC-AAGTCCCACGAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAA 293326 ||| | ||| || ||| |||| | | | ||||||||| | || | | |||||| | Sbjct 137308 CATCGAGTCGTTCCAAAGGCCCA-GCTCCACGAGCTCGCGCAAGAGCCACGGGTTGACCA 137250 Query 293327 CGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATGTT 293366 | |||||||||| ||||| || || |||||||||| Sbjct 137249 CCTGGAACTCACCGGCGAGCACACGGCGCATGTAAATGTT 137210 >seq75 Length=415383 Score = 111 bits (122), Expect = 3e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||||||| ||||| | |||||||| || || |||| ||||||||||| ||| Sbjct 253556 GGCGAGGATCTGTGTAACTGTCAGTTCTCGCTGGCCTACGGTGCCAAGATTCTGCTGAAC 253497 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | ||||||||||| |||| || |||||| |||| || || | Sbjct 253496 ACCGCCACCCTGCGCCTCAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAACGGTTCC 253437 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 |||||| || || ||||||||||| ||||||||| | || || || || | Sbjct 253436 GGTAAGTCGACCCTGATGCGCGCCATCCAGAACGGTCAGGTCGAGGGCTTCCCCTCGCCC 253377 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 ||||| | || ||| || ||||||||| ||||| Sbjct 253376 GAGGAGGTGCGCACCTGGTACGTCGAGCACGACCTCGAC 253338 >seq48 Length=369614 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||| | || || || ||||| |||||| |||||| ||||| || || || |||||| Sbjct 304513 GGTGTGGTGGGTCCGAACGGTGCTGGTAAGAGTACCCTTATCAAGGTGCTCACCGGCGAG 304454 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 | | | || ||||| || ||||||||||||| |||| |||| | || Sbjct 304453 ATTGTGCCGACGGAGGGCAAGGTCGAGAAGCATCCCAACCTGCGTGTGGCGATGATGGCG 304394 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 ||||| || |||||||| | ||| | |||||||| | || | | ||||||||||| Sbjct 304393 CAGCATGCGTTCCACCATCTTGAGCAGCACCTGGAGAAGAGTGCGTGCCAATACATTCGC 304334 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 304333 TGGCGTTA 304326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835259208397