Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq111 107 2e-18 seq106 100 2e-16 >seq111 Length=547826 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| ||||| | || ||| || || || || || || ||| || Sbjct 165907 TCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAG 165848 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||||||||||||||||||||| || ||||| ||||| || | | Sbjct 165847 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 165788 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | ||| || || || | || | ||| ||||| |||||||| || || Sbjct 165787 TCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTCTTGACG 165728 Query 114372 AAAATCTGCATGGC 114385 || || |||||||| Sbjct 165727 AAGATTTGCATGGC 165714 >seq106 Length=438498 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||||| ||| ||| ||| || || || || |||||| || Sbjct 197883 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAG 197942 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||||||||||||||| || || || ||||| ||||| || | | Sbjct 197943 ATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTC 198002 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||||| || || || || | ||| | ||| || ||||| || || || || Sbjct 198003 TCGATCGTGTCGGAAGACTCCACCTCGAGGGTAATCGTCTTCCCGGTAAGGGTCTTGACG 198062 Query 114372 AAAATCTGCATGG 114384 || | ||||||| Sbjct 198063 AACACTTGCATGG 198075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133800914604