Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq111 87.8 1e-12 seq106 87.8 1e-12 >seq111 Length=547826 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 33912 CCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CGCT 33970 ||| ||||| || || || ||||||||||||||||||||||| || || | || || Sbjct 165932 CCGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTC-GCTGAGGGTGCGAC 165874 Query 33971 CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTT 34030 |||| || | ||||||||||| || ||||||||||| || ||| || | || ||| | Sbjct 165873 CGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCT 165814 Query 34031 TGTCC 34035 ||||| Sbjct 165813 TGTCC 165809 >seq106 Length=438498 Score = 87.8 bits (96), Expect = 1e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| |||||||| || || ||||||||||||||||| |||||||| || Sbjct 197846 ACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 197905 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || | || || | || |||| |||||||| || || ||||||||||| || ||| | Sbjct 197906 CAGAGTG-CGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAG 197964 Query 34019 GCACGCTCTCTTTGTCC 34035 | | | ||| |||||| Sbjct 197965 GGATACCCTCCTTGTCC 197981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061833813834