Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq75 122 2e-22 seq74 84.2 5e-11 >seq75 Length=415383 Score = 122 bits (134), Expect = 2e-22 Identities = 182/257 (71%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 334101 ATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCA 334160 || ||||| | |||| |||| | || || |||||||| ||||| || ||||| Sbjct 253303 ATAAAGTCCAGAATAGAAATGTCACCCTCCGAGCCGTCGAGGTCGTGCTCGACGTACCAG 253362 Query 334161 GTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATC 334220 || || | || | |||||||| || || | |||||||||| || ||||||||| Sbjct 253363 GTGCGCACCTCCTCGGGCGAGGGGAAGCCCTCGACCTGACCGTTCTGGATGGCGCGCATC 253422 Query 334221 AGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGA 334280 || || || ||||| | ||||| | ||||| ||||||||||||| |||||||| || Sbjct 253423 AGGGTCGACTTACCGGAACCGTTACGACCACAGAGACCGTAGCGGTGGCCACGCTTGAG- 253481 Query 334281 TTGAACCGCGT---ATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAA 334337 | | | || ||||||| ||||| || |||| || ||||| || || | ||| Sbjct 253482 --GCGCAGGGTGGCGGTGTTCAGCAGAATCTTGGCACCGTAGGCCAGCGAGAACTGACAG 253539 Query 334338 TCACACAGATCCTCACC 334354 | |||||||||||| || Sbjct 253540 TTACACAGATCCTCGCC 253556 >seq74 Length=174556 Score = 84.2 bits (92), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 243487 GAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTG--CG 243544 || ||||| || | || ||||| || || || | | || |||| || |||| || Sbjct 123773 GACACGGTGAACCGCATTATCACCGAGGCCGTGGCCATTGAGCAGGACTT--TTTGACCG 123716 Query 243545 ACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAAT 243604 | ||| | || | ||| || || |||||| || || ||| | |||||||| || | Sbjct 123715 ATGCTCTGCCTGTCTCGCTGATCGGTATGAACGCTCGCCTGATGTGCCAGTACATTGAGT 123656 Query 243605 TCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACC 243664 | || ||||||||| | || || || || | || |||||||| | ||||| Sbjct 123655 TTGTGGCCGACCGCCTGCTCGTCAACCTGGGCAACCCCAAGCACTACAACTCGACGAACC 123596 Query 243665 CCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 |||||| |||||||||| ||||||||| || || || | ||||| ||||| Sbjct 123595 CCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGA 123544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878346713950