Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq74 161 9e-35 seq106 116 4e-21 seq111 113 4e-20 >seq74 Length=174556 Score = 161 bits (178), Expect = 9e-35 Identities = 254/361 (70%), Gaps = 11/361 (3%) Strand=Plus/Minus Query 47223 ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAAC 47282 |||||||| || |||| ||| ||||| |||||| | ||||| || ||||||||| || Sbjct 123878 ATGCCCGGTCTTTCGTTCTCCAATGAGCTCATCTCGCGTGACGAGGGTCTGCACACCGAC 123819 Query 47283 TTTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTTGGACGTGCCC----ACCGT 47338 |||||||| |||| | || | | | || | ||| | || ||| || || Sbjct 123818 TTTGCCTGCCTCTTGTTCAGCCAT----TTGA--AGAAGCGCG-CGCACCCTGACACGGT 123766 Query 47339 CAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCC 47398 | | ||| | |||| ||||| ||||||||| ||| ||||| |||| |||||||| Sbjct 123765 GAACCGCATTATCACCGAGGCCGTGGCCATTGAGCAGGACTTTTTGACCGATGCTCTGCC 123706 Query 47399 CGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGA 47458 | || | | || |||||||| ||||| | ||||||| || ||||| ||||| Sbjct 123705 TGTCTCGCTGATCGGTATGAACGCTCGCCTGATGTGCCAGTACATTGAGTTTGTGGCCGA 123646 Query 47459 CCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTT 47518 |||||||||||| | || | |||||| ||| || | ||| || || || || Sbjct 123645 CCGCCTGCTCGTCAACCTGGGCAACCCCAAGCACTACAACTCGACGAACCCCTTTGACTT 123586 Query 47519 TATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||| | |||||||||||| |||||||| | |||||||||||| ||||| | ||| || Sbjct 123585 TATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 123526 Query 47579 T 47579 | Sbjct 123525 T 123525 Score = 141 bits (156), Expect = 9e-29 Identities = 561/854 (66%), Gaps = 44/854 (5%) Strand=Plus/Minus Query 145712 CTTCGGC---GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGT 145768 ||||||| ||||||||||||||| | || || || || || |||||||| |||| Sbjct 137612 CTTCGGCCGTGTCGACGGTGAACTGGATGGCCTGCGCAGCGGGGCGCGTGCGCAGGTAGT 137553 Query 145769 ACATGCCGGTCTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGA 145826 | |||||||||||| |||| ||| ||||||||| || || | ||||| | Sbjct 137552 AGGAGCCGGTCTTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAA 137493 Query 145827 GTACGTGGGTTCGGCGACAAACAAATTTAGAGATT--GGCTCTGATCAATGAAAGGAGCC 145884 | || || || || ||| | |||| | ||||||| || ||| | ||| Sbjct 137492 --AGGTCGGCGCGCT--CAGGTGAATGTTGAGACTCTGGCTCTGG-CACACAAACGCGCC 137438 Query 145885 -CGGTCGGCGGCCATGTCTATCATGCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAG 145943 ||||| || |||||||| || || |||| |||| ||||| |||| || | || Sbjct 137437 ACGGTCCGCCGCCATGTCAATGATCACCTTTTGGCTAATCTCCCACACGGTCTTGTAAAG 137378 Query 145944 ATCCTTGACGTGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATAT 146003 |||||| ||| | || || | | | ||| || | || || | || |||| Sbjct 137377 CGCCTTGATGTGGTCAGGGATGCCAGCCACGTTTTGGATCGAGCCGCCATGCGC-AATAA 137319 Query 146004 TTTGTTGCGCAATTC-TGGAGT-GT---AAATGTTCAAGTCTACGAGGGCCTTGATGAGA 146058 | | |||| ||| | |||| || ||| | || || ||||| | | ||| Sbjct 137318 TCTTTTGC----TTCATCGAGTCGTTCCAAAGGCCCAGCTCCACGAGCTCGCGCAAGAGC 137263 Query 146059 TACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTG 146118 || ||||||||||||| ||||| |||||||| || || | || || | |||||||||| Sbjct 137262 CACGGGTTGACCACCTGGAACTCACCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTG 137203 Query 146119 AACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTAC 146178 |||||||||| |||||||| || | ||||| |||| || || ||||| | Sbjct 137202 TACGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTCGAGGCCGTGGGCATAGGC 137143 Query 146179 GCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCA 146237 |||| |||||| ||||| | || ||||| || | ||||||| || || || ||| Sbjct 137142 GCCATCAGCAACGAGTTGCGCAAACCGTG-CTGGGCAATCTTTGCCTTGAGGGAGGCCCA 137084 Query 146238 ATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGC-ATAGTGCC-GCGG 146295 | ||||| | ||||| || | || ||| |||||| ||| | || || ||| Sbjct 137083 GTCCCACA---GGTCCGTCGGCGTGCGGTTCCAGTGGTCGTACTGCAAGAGACCCTGCGA 137027 Query 146296 AACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTG---GCCAGTTCGCAG 146352 | || ||||| |||||||| || || || || | || | ||||| |||||| Sbjct 137026 AGCA--GGGCTGCCCTCGTACGTCTCGTAGGGGCCAT---ACTCGGCAGCCAGCTCGCAG 136972 Query 146353 CTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTA-GTTGACGCTCCTGGC 146411 || ||||| |||| || || ||||| |||| || | ||| | | || Sbjct 136971 CTGCGCTCCAGCGCCGCGTGATAGATAGTCTCGAAGATC-TGCACGTTCAGCAGGCGCGC 136913 Query 146412 CTCCTCGCTGTCGTAGGGGATA-TCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCC 146470 ||||| ||||||| | ||||| | | | || ||| || || || |||||||| | | Sbjct 136912 CTCCTGGCTGTCG-AACGGATAGCCCATGATCATAAACGCATCCGCCAGACCCTGGACAC 136854 Query 146471 CGACACCAACGGGGCGGTGTTTCTTGTTACTG-TTCGCAGCGCCCGCAGTGGGATAGTGG 146529 ||| ||| | ||||||||| | |||| | ||| || | | | ||| |||| | Sbjct 136853 CGATACCGATGGGGCGGTGGCGCATGTTCGAGCGGCGC-GCACTCTCCACGGGGTAGTAG 136795 Query 146530 TTGCTGTCGATGAT 146543 ||| |||||||||| Sbjct 136794 TTGATGTCGATGAT 136781 >seq106 Length=438498 Score = 116 bits (128), Expect = 4e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||| | || | ||| ||| || || || ||||| ||| Sbjct 197844 GCACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 197903 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || |||||| ||| || ||||| || |||||| |||||| ||||| || || ||| Sbjct 197904 CTCAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGA 197963 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||||| | |||| ||||| | | ||| Sbjct 197964 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCC 198023 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| || ||||| || || || || || | ||||||| Sbjct 198024 ACCTCGAGGGTAATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 198075 >seq111 Length=547826 Score = 113 bits (124), Expect = 4e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| | |||||| || || ||||| || || ||| | Sbjct 165908 CTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 165849 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || ||||| ||||||||||||||| ||| || ||||| | Sbjct 165848 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 165789 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| ||| || || | || | ||| ||||| |||||||| || || Sbjct 165788 GTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 165729 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 165728 GAAGATTTGCATGGC 165714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500104580080