Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq74 118 1e-21 seq106 89.7 5e-13 >seq74 Length=174556 Score = 118 bits (130), Expect = 1e-21 Identities = 702/1109 (63%), Gaps = 43/1109 (4%) Strand=Plus/Plus Query 123237 ATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAA 123293 ||||| || || ||||| ||| | | ||| |||| |||||||||||||| ||| Sbjct 136157 ATGCTCCGCGTGTACAACAACACTGCGCGCTACGTGGACCAGGGCGGCAACAAGCGCCCC 136216 Query 123294 GGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTT-TTAAATTT 123352 || || | |||||||| || || ||||||||| || |||| || || || | | Sbjct 136217 GGAGCCTTTGCGATCTACCTCGAGCCGTGGCACTCGGACGTGTTTGAGTTCATTGACCTG 136276 Query 123353 AAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGT 123412 | | | || || ||| || | || ||||| |||| || | ||| | Sbjct 136277 CGCAAGAACCACGGTAA-GGAGGAGGTGCGTGCGCGCGACCTGTTCCTGGCCCTGTGGAT 136335 Query 123413 ACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGA 123472 || || |||| ||||| ||||| | | |||||| |||||||| ||||| || | Sbjct 136336 TCCTGACCTGTTCATGCGCCGCGTCGAGCAGAACGGCGACTGGTCGCTTATGTGCCCTGC 136395 Query 123473 TCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATA 123532 ||| || ||| || ||| |||||| | ||||||| | ||||||| | || Sbjct 136396 CGAGTGCCCGGGCCTGGCTGACTGCTACGGCGAGGAGTTTGATGCCTTGTACGAAAAGTA 136455 Query 123533 CGAGCGCGAAGGCA-----AACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTT 123587 ||||||||| ||| || | | |||| | | | | | | || | | Sbjct 136456 CGAGCGCGAGGGCCGTGCGAAGCGCTCCGTCAAGGCGCAGAA---GCTCTGGT--ACGCC 136510 Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 ||| | || | || |||| ||||| | || | ||| || ||||| ||| | |||| Sbjct 136511 ATTTTGGAGGCCCAGATCGAGACCGGCAATCCCTTCATCCTGTACAAGGACTCGGCCAAC 136570 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 | || | ||| |||| ||| | || || || || | || || || ||||||| Sbjct 136571 CGCAAGAGCAACCAGAAGAACCTCGGCACGATCAAGAGCTCGAACCTGTGTACCGAAATC 136630 Query 123708 ATCGAATACAGCGATGCCGATCAAGTG-GCCGTGTGTAATTTGGCTTCGATTTGCGT--- 123763 |||||||||||| |||| | || |||||||| || |||| |||||| |||| Sbjct 136631 ATCGAATACAGCTC-GCCGGACGAGACTGCCGTGTGCAACCTGGCCTCGATT-GCGTTGC 136688 Query 123764 -GAA--TCGTTGCGTCGAAAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAA 123820 || || ||| | | | ||||||| || | | || | ||| | || Sbjct 136689 CGACCTTCATTGAG--GGCACTGGCGCTTCGAAGACGTACAACTTCCAGCGCCTG-CACG 136745 Query 123821 AACTGTAGTA----------AAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTT 123870 | ||| | | ||||| |||||| || ||||| | || | || || Sbjct 136746 ACGTGTCGAAGGTGGTTTGCAAGAACTTGAACCGCATCATCGACATCAACTACTACCCCG 136805 Query 123871 TGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGT 123930 ||||| ||||| || || || ||| | || |||| | || | || || Sbjct 136806 TGGAGAGTGCGCGCCGCTCGAACATGCGCCACCGCCCCATCGGTATCGGTGTCCAGGGTC 136865 Query 123931 TGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTA 123990 |||| || |||||| | || || || |||| ||| ||| | || || |||| | Sbjct 136866 TGGCGGATGCGTTTATGATCATGGGCTATCCGTTCGACAGCCAGGAGGCGCGCCTGCTGA 136925 Query 123991 ATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGC-G 124049 | ||| || ||| || || ||| ||| || ||||| |||||||| || || | Sbjct 136926 ACGTGCAGATCTTCGAGACTATCTATCACGCGGCGCTGGAGCGCAGCTGCGAGCTGGCTG 136985 Query 124050 AAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAG 124109 | | | ||| | ||||| | |||| ||||||||| || | ||| | |||||| Sbjct 136986 CCGAGT-ATGGCCCCTACGAGACGTACGAGGGCAGCCCTGCTTCGCAGGGTCTCTTGCAG 137044 Query 124110 TACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT--TTAAAACAAC 124167 |||||| ||||| || ||||| | ||||||||||| || | | || ||| Sbjct 137045 TACGACCACTGGAACCGCACGCCGACGGACCTGTGGGACTGG-GCCTCCCTCAAGGCAAA 137103 Query 124168 GCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCA 124227 | | | | |||||||||||| |||||| || || ||||| ||||| ||||| | | Sbjct 137104 GATTGCCCA-GCACGGTTTGCGCAACTCGTTGCTGATGGCGCCTATGCCCACGGCCTCGA 137162 Query 124228 CTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGC 124287 | ||| || || || |||||| | ||||||||||| ||| | ||| | ||| ||| Sbjct 137163 CCAGTCAGATCTTGGGCTTCAACGAGTGCTTCGAGCCGTACACCAGCAACATTTACATGC 137222 Query 124288 GACGAGTGTTAGCCGGCGATTTTCAAGTG 124316 | || ||| | ||||| || || || ||| Sbjct 137223 GCCGTGTGCTCGCCGGTGAGTTCCAGGTG 137251 >seq106 Length=438498 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || | || ||| || || ||||| ||||| ||||| || || ||||| Sbjct 197847 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 197906 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| |||| || || || ||| | |||| || || |||||||| || Sbjct 197907 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 197966 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || || || || || |||| || | |||||||||||||| || Sbjct 197967 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACC 198026 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| |||| ||| || ||||| || || || || || | |||||| Sbjct 198027 TCGAGGGTAATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 198073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002538945320