Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq74 185 1e-41 seq75 120 4e-22 >seq74 Length=174556 Score = 185 bits (204), Expect = 1e-41 Identities = 867/1362 (64%), Gaps = 35/1362 (3%) Strand=Plus/Minus Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 |||||||| ||||| || | || || |||||| | ||||| ||||| |||||||| Sbjct 137244 AACTCACCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTACGGCTCGAAGCACTCG 137185 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 ||| |||||||| || || ||||| |||||||| || ||||| || | |||| Sbjct 137184 TTGAAGCCCAAGATCTGACTGGTCGAGGCCGTGGGCATAGGCGCCATCAGCAACGAGTTG 137125 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 116055 || | ||| | ||| | ||||||||| | ||||||| | | | | | | Sbjct 137124 CGCAAACCGTGCTGGGCAATCTTTGCCTTGAGGGAGGCCCAGTCCCACAGGTCCGTCGGC 137065 Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115 | | ||| || |||| | || ||| || || || || ||||| | ||| Sbjct 137064 GTGCGGTTCCAGTGGTCGTACTGCAAGAGACCCTGCGAAGCAGGGCTGCCCTCGTACGTC 137005 Query 116116 TCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 116175 || || ||||| | | | |||| ||| |||| ||| || || |||||||| || Sbjct 137004 TCGTAGGGGCCATACTCGGCAGCCAGCTCGCAGCTGCGCTCCAGCGCCGCGTGATAGATA 136945 Query 116176 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCAC 116235 ||||| || || | | |||| ||||| | | || |||| || | || Sbjct 136944 GTCTCGAAGATCTGCACGTTCAGCAGGCGCGCCTCCTGGCTGTCGAACG-GATAGCCCAT 136886 Query 116236 AAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294 | ||||| ||||||| ||||| |||||||||| || || ||||| || | ||| || Sbjct 136885 GATCATAAACGCATCCGCCAGACCCTGGACACCGATACCGATGGGGCGGTGGCGCATGTT 136826 Query 116295 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354 || || || |||||||||| || | || | ||||| | | || | || || Sbjct 136825 CGAGCGGCGCGCACTCTCCACGGGGTAGTAGTTGATGTCGATGATGCGGTTCAAGTTCTT 136766 Query 116355 GGTGACAACCTTTGTGATTTCATG----------AAGCTTTTCGTAATCAAAACTGCGAG 116404 | || ||||| | | || || ||| | | ||| || || | || || Sbjct 136765 GCAAACCACCTTCGACACGTCGTGCAGGCGCTGGAAGTTGTACGTCTTCGAAGC-GCCAG 136707 Query 116405 TCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCAT 116464 | | ||| ||| | | || | || || || ||||| || ||||| | ||||| | Sbjct 136706 TGCCCTCAATGA---AGGTCGGCAACGCAATCGAGGCCAGGTTGCACACGGCAGTCTCGT 136650 Query 116465 CCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGT 116524 || |||| || || ||||| ||||||| || || ||||| || ||||| | || Sbjct 136649 CCGGCGAGCTGTATTCGATGATTTCGGTACACAGGTTCGAGCTCTTGATCGTGCCGAGGT 136590 Query 116525 TCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCT 116584 |||| || || ||| ||| || |||||||| || || | || | || |||| Sbjct 136589 TCTTCTGGTTGCTCTTGCGGTTGGCCGAGTCCTTGTACAGGATGAAGGGATTGCCGGTCT 136530 Query 116585 CCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCT 116643 | | |||| || | ||| || | ||| | | || ||| || | || | | || || Sbjct 136529 CGATCTGGGCCTCCAAAATGGCGTACCAGAGCTTCTGCGCCTTG-ACGGAGCGCTTCGCA 136471 Query 116644 CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGA 116702 || ||||| |||||||||| ||| | ||| |||||||| || || ||| || | Sbjct 136470 CGGCCCTCGCGCTCGTACTTTTCGTACAAGGCATCAAACTCCTCGCCGT-AGCAGTCAGC 136412 Query 116703 GAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 116762 || || || || | || || | || ||||| | || || ||| || || Sbjct 136411 CAGGCCCGGGCACTCGGCAGGGCACATAAGCGACCAGTCGCCGTTCTGCTCGACGCGGCG 136352 Query 116763 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 116822 |||||| ||||| || ||||| || ||| ||| || || || || | || || | Sbjct 136351 CATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTT 136292 Query 116823 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882 || || || |||| || | || || | | |||| ||||||||| || ||||| Sbjct 136291 ACCGTGGTTCTTGCGCAGGTCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTA 136232 Query 116883 CACCGCGATTGACCCCTTGCGACGA---CCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939 | ||| | | || ||| || |||||| || || | ||| || ||| Sbjct 136231 GATCGCAAAGGCTCCGGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCAGTGTTGTT 136172 Query 116940 AAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAAT--AC 116995 | ||||| ||||| || | ||||| | | || || || || || ||| | Sbjct 136171 GTACACGCGGAGCATCGGCACAATACCGTTGCTGACA--CCGTTCGTGCCAGCAATGTAG 136114 Query 116996 GAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055 ||| || |||| | | | |||||||| || ||| ||||| || ||| ||| || Sbjct 136113 GAGCCTG--TGGCACGAATGTTGTGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGA 136056 Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115 | ||||| | |||| || |||| || || || |||||||| |||| | | Sbjct 136055 TCATAGCGCAGGTCTTGAGCGTGTCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCA 135996 Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 117175 ||||||||| ||||||||| || | || |||||||||||||| ||||| || | || Sbjct 135995 CAAGGAAGCAGGACGACATTTGGGGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACG 135936 Query 117176 CGTGGATGAA--CATACCTTGGGACATCTTATCGTAGGTCTC 117215 |||| |||| | | | | |||||| | | ||||||||| Sbjct 135935 CGTGCGTGAAGGCCTTC--TCGGACATGTAGTTGTAGGTCTC 135896 Score = 122 bits (134), Expect = 1e-22 Identities = 169/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| |||||||||||||| |||||||| ||||| ||||| | ||||| Sbjct 123814 GCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCATTGGAGAACGAAAGACCG 123873 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| |||||||| | |||||| |||| || ||||||||||| ||||| Sbjct 123874 GGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCAGAGAAAAAGATA 123933 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AA 127698 ||||| ||| || || || | || ||||| | || ||| | | |||| | | Sbjct 123934 CCCTCAACAGCGGCAAAGGCCACCAGGCGCTCCGAGAACGAG-GCGCGCTTGTCCGAGAT 123992 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 ||| || |||||||| ||||| | || || |||| ||||| ||| || Sbjct 123993 CCAACGCAGCGCCCACTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGATGGC 124046 >seq75 Length=415383 Score = 120 bits (132), Expect = 4e-22 Identities = 230/335 (69%), Gaps = 12/335 (4%) Strand=Plus/Plus Query 176596 CTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 176655 |||||| || ||||| | |||| || || | ||||| ||| || ||||| ||||| || Sbjct 132775 CTTGAGCAGCGATGGGTAAAAGTGGTCGAGGAAATTGATGATCAGGCCCTTGATGTGCGA 132834 Query 176656 ACCATCGTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACA-T 176714 ||||| ||| || ||||| ||||| || | ||| || || || | ||| | Sbjct 132835 GCCATCAAAGTCCTGGTCGGTCATGATCATCAGGCTACCGTATCGCAGGCCATCCACACT 132894 Query 176715 CTTGATAATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGT 176774 ||| || | || || || || | ||||| ||||| ||||| || |||| ||| || Sbjct 132895 GTTG-TACACTTTTCCATGCTGCAAACCCAGAATCTCCTTGATATGCTTGATCTCGGCGT 132953 Query 176775 T-----TGATGTGAGTTGCGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAG 176829 | |||| || || | || || || || || ||||| ||| ||||| || Sbjct 132954 TCTTCATGATCTG-GTCGTGCGAC----GCCTCACGCACATTGAGCAGCTTACCGCGTAG 133008 Query 176830 AGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTT 176889 ||||||||||| || ||||||||| ||| || || ||| | || ||||||| ||| Sbjct 133009 CGGGAACACACCATACGCATCACGACCCACCTCACTGATACCCGACACGGCGAGGGCCTT 133068 Query 176890 CGCGGAATCACCCTCCGTCACGATGAGCGTACACT 176924 || || ||||| ||||| | ||| ||||| |||| Sbjct 133069 GGCCGAGTCACCTTCCGTAAGGATCAGCGTGCACT 133103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506302745720