Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq74 172 9e-38 >seq74 Length=174556 Score = 172 bits (190), Expect = 9e-38 Identities = 508/766 (66%), Gaps = 18/766 (2%) Strand=Plus/Minus Query 203841 TGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGG 203900 |||| || |||||||| ||||| | | | || || | | | ||| ||||| ||||| Sbjct 137603 TGTCGACGGTGAACTGGATGGCCTGCGCAGCGGGGCGCGTGCGCAGGTAGTAGGAGCCGG 137544 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960 |||| |||||||||| ||| ||||| | |||||| || | || | | | | | || Sbjct 137543 TCTTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAAAGGTCGGCG 137484 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019 || || ||||||||| ||| |||||| ||| | ||| ||||| || || || ||| Sbjct 137483 CGCTCAGGTGAATGTTGAGACTCTGGCTCTGGCACAC-AAACGCGCCACGGTCCGCCGCC 137425 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG-AACACGTCTCTGGTGTG 204078 || | || || ||| || |||||||||||| |||||| || || || || |||| Sbjct 137424 ATGTCAATGATCACCTTTTGGCTAATCTCCCACACGGTCTTGTAAAGCGCCT-TGATGTG 137366 Query 204079 TTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCAT-CCTC 204136 | ||| | | |||||| | |||||||||| | || || | ||| | | || Sbjct 137365 GTCAGGGA-TGCCAGCCACGTTTTGGATCGAGCCGCCATGCGCAAT-AATCTTTTGCTTC 137308 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 || || ||| | ||||| | | ||||| |||| || ||||||| | | Sbjct 137307 ATCGAGTCGTTCCAAAGGCCCAGCTCCACGAGCTCGCGCAAGAGCCACGGGTTGACCACC 137248 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256 || || || |||| ||||| | || || | | |||| ||||| | || ||||| | Sbjct 137247 TGGAACTCACCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTACGGCTCGAAGCAC 137188 Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316 |||||| ||| || |||||| ||| |||||||||||| || |||| |||| ||| Sbjct 137187 TCGTTGAAGCCCAAGATCTGACTGGTCGAGGCCGTGGGCATAGGCGCCATCAGCAACGAG 137128 Query 204317 TTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTG 204376 ||||||| ||||| | | | | ||| || |||| |||||| || | | Sbjct 137127 TTGCGCAAACCGTGCTGGGCAATCTTTGCCTTGAGGGAGGCCCAGTCCCACAGGTCCGTC 137068 Query 204377 GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTAC 204436 || | | ||| |||| |||| |||| || || | |||||||||| |||| Sbjct 137067 GGCGTGCGGTTCCAGTGGTCGTACTGCAAGAGACCCTGCGAAGCAGGGCTGCCCTCGTAC 137008 Query 204437 GTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCG-GCCA---TGGCGTGATA 204492 ||| || || || ||| | ||||||| ||| | ||| ||| |||||||| Sbjct 137007 GTCTCGTAGGGGCCATACTCGGCAGCCAGCTCGCA-GCTGCGCTCCAGCGCCGCGTGATA 136949 Query 204493 GTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTCCGTTCCGTCAAACGCCA 204551 | || ||||| |||||||| ||| || | | |||| |||||| | ||| |||| Sbjct 136948 G---ATAGTCTCGAAGATCTGCACG-TTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGAT 136893 Query 204552 GACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCCGATTCC 204597 |||| || |||| | ||||||| ||||| || ||||| || Sbjct 136892 AGCCCATGATCATAAACGCATCCGCCAGACCCTGGACACCGATACC 136847 Score = 91.5 bits (100), Expect = 2e-13 Identities = 284/434 (65%), Gaps = 8/434 (2%) Strand=Plus/Minus Query 205264 GTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTG 205323 ||| | |||||||||||| | | | || | || || || | |||||| || ||||| Sbjct 136255 GTCCGAGTGCCACGGCTCGAGGTAGATCGCAAAGGCTCCGGGGCGCTTGTTGCCGCCCTG 136196 Query 205324 GTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGT 205383 |||||| ||| | | |||| | || || ||||||||||| | ||||||| | Sbjct 136195 GTCCACGTAGCGCGCAGTGTTGTTGTACACGCGGAGCATCGGCACAATACCGTTGCTGAC 136136 Query 205384 CCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAAT 205443 |||||||||| ||| |||||| || | | |||| |||| | || || Sbjct 136135 ACCGTTCGTGCCAGCAATGTAGGAGCCTGTGGCACGAATGTTGTGGATGTTCAGACCGAT 136076 Query 205444 CCCGCCAGAACACTTGGCGATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGA 205502 ||||||| |||| |||| ||||| ||||| || ||| ||| || || | | Sbjct 136075 ACCGCCAGCCGTCTTGCTGATCATAGCGCAGGTCTTG-AGCGTGTCGTAAATACCCTCAA 136017 Query 205503 TGGAATCGTCCGCCAGTGTCACCAGATAGCACGAAGCCAGCTTGGCAAAGTT---GGTGC 205559 | || |||||| || |||| || |||| || | || |||| ||| || | Sbjct 136016 TCGAGTCGTCCTTCATACTCACAAGGAAGCAGGACGACA-TTTGG--GGGTTAGGCGTAC 135960 Query 205560 CCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGG 205619 | |||| ||| || || || ||||| ||||| ||||||| || | |||||| Sbjct 135959 CAGCGTTGAACAGGGTCGGCGACGCGTGCGTGAAGGCCTTCTCGGACATGTAGTTGTAGG 135900 Query 205620 TCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGT 205679 |||| | |||||| || ||| |||||| || |||| || | | ||||| | || Sbjct 135899 TCTCGATGGCGCTCTTCACATCCTCGCCGTGGATGCCTACAGCAACACGCATGAGCATGT 135840 Query 205680 GTTGAGGTCTCTCC 205693 | ||||| | |||| Sbjct 135839 GCTGAGGGCGCTCC 135826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154037085520