Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq106 109 1e-18 seq111 102 2e-16 >seq106 Length=438498 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| ||||||||||| || |||||| |||| ||||||||| || ||| Sbjct 197853 CGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTG 197912 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| || |||||||| || ||||| ||||||||| || || Sbjct 197913 CGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCC 197972 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | | || || || | Sbjct 197973 TCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGG 198032 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || || | ||| Sbjct 198033 GTAATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTG 198070 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || || || || ||||||||||| |||||||| | ||| Sbjct 106791 CGCAGACGCAGCACGAGATGCAGTGTGCTCTCCTTTTGGATATTGTAGTCGCTTAGAGTG 106732 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||||||||| || || || || || |||||||||||||| ||| ||| Sbjct 106731 CGTCCATCTTCCAGCTGCTTACCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATCCCT 106672 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||| ||||| Sbjct 106671 TCCTTGTCCTGGATCTT 106655 >seq111 Length=547826 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || |||||| || | ||||||||| | || | || || Sbjct 165928 AGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCC 165869 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || ||||| ||||||||| ||| || || ||| Sbjct 165868 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 165809 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||| | | || || || | |||||||||| Sbjct 165808 TGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTC 165749 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || ||||| Sbjct 165748 TTGCCAGTCAGAGTCTTGACGAAGATTTG 165720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919832722839