Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq83 448 6e-121 seq117 161 1e-34 seq56 100 4e-16 seq29 87.8 2e-12 >seq83 Length=441723 Score = 448 bits (496), Expect = 6e-121 Identities = 788/1138 (69%), Gaps = 16/1138 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||||| | |||||| || ||||| | || ||||| ||||| ||||| |||||||| Sbjct 215153 TCACCCGACAGGATGGCAGCCTGGACGGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTG 215094 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 |||| || || | || || || || | || | | | || | ||| Sbjct 215093 ATCGACTTGTTGGGCTCACGGCCATTGAAGAAGTCACGGAGGAGCTTCTGCACACGGGGG 215034 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT---TTATCGATCTTT 7186 || || ||||| |||||||||| ||||| || || || ||| || |||||||| Sbjct 215033 ATACGGGTCGAACCACCGACCAGGACGATCTCGTTGAC---CGAGCCCTTGTCGATCTTG 214977 Query 7187 GAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG-GAACAAGTCCATACACAG 7245 | ||| || || || ||||| || || || | | || ||| | ||| |||||| Sbjct 214976 GCGTCGCGGAGCACCTTCTCGACGGGGTCGATGG-TGTGCGAGAAGAGGTCACCACACAG 214918 Query 7246 TTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATC 7305 ||||| || || |||||||| || || || ||||| |||| ||| ||| | | ||| || Sbjct 214917 CTCCTCGAAGCGGGCACGGGTGATCGAGGTGTAGAAGTCAATGCCCTCGAACAGCGAGTC 214858 Query 7306 AATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGT 7365 || || ||||| || || || | ||| || | || ||||| || ||||| | || || Sbjct 214857 GATCTCGATGGTGGTCTGGGCAGCCGACGACAGAGTGCGCTTAGCACGCTCCGAAGCAGT 214798 Query 7366 TCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAA 7425 |||| |||||| || ||||| | ||| || | || ||||| | || || || || Sbjct 214797 GCGTAGACGACGCAGAGCACGAGCGTTGGTGGTCAGGTCCTTCTTGTTCTTGCGCTTGAA 214738 Query 7426 CTCTT-CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTAT 7484 ||| | || | ||||| | ||| | || || || |||||||| | ||| || | Sbjct 214737 CTCCTGCACA-AAGTGGTTGACGAGACGGTTGTCAAAGTCCTCACCACCAAGGTGGGTGT 214679 Query 7485 CCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAA 7544 | || ||||| || ||||| ||||||||||| | |||||| | | | ||| ||||||| Sbjct 214678 CACCAGCGGTGGCCTTGACCTCAAAGATACCCTCCTCAATGGTCAGGAGCGACACATCAA 214619 Query 7545 ACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGA 7604 | ||||||||||||||||| ||||| || |||||| | ||| |||| | ||||| |||| Sbjct 214618 AGGTACCACCACCCAGGTCGAAAATCAGGACGTTCTTCTCGGCGTCGTCCTTCTTGTCGA 214559 Query 7605 GACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAG 7664 ||||||| |||||||| || || || || || || || ||||| | | ||||||||| | Sbjct 214558 GACCGTAGGCGATAGCGGCGGCAGTGGGCTCGTTGATGATACGCATAACGTTCAGGCCGG 214499 Query 7665 CAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCG 7724 |||| | || || || || || || || ||||| ||||| |||||||| ||||| | Sbjct 214498 CAATGACACCAGCGTCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGTAGGCAGGGACAG 214439 Query 7725 TTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGG 7784 | || || |||||| | || | | || || || | || ||| | || ||| ||| Sbjct 214438 TGACCACGGCGTCCTTCACGTCCGAGCCAAGGTAGGCCTCGGCGGTCTCACGCATCTTGA 214379 Query 7785 TAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAA 7844 || |||||||| || ||||| |||| || || ||| ||||| || | || | Sbjct 214378 GCAGGACCATCGACGAGATCTCCTCAGGCGTGAAGATCTTCTCCTCACCCTTGTACTCGA 214319 Query 7845 CTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATAT 7904 | || | ||| || ||| || | | || || | | ||| | ||||| | Sbjct 214318 CGCGGATGACGGGCTTGCCCG-AG--CGGTCGACGACAGCGAAGGGCCAGTGCTTCATGT 214262 Query 7905 CGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTG 7964 | ||||||| ||| ||||| | || ||||||||||| || || || || | Sbjct 214261 CCGACTGGACCTCAGTGTCGTTGAACTTGCGGCCAATAAGACGCTTGGCGTCGAAGACAG 214202 Query 7965 TGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTAT 8024 |||| | |||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct 214201 TGTTGTGGGGGTTCATGGCCACCTGGTTCTTGGCGGCGTCACCGATCAGACGCTC---CG 214145 Query 8025 TTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTT 8084 | || || || || |||||||| |||||||| || || || ||||||||||| || | | Sbjct 214144 TGTCGGTGAAGGCAACGTACGACGGGGTCGTACGGTTACCCTGGTCGTTCGCGATCACCT 214085 Query 8085 CTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 | || |||||||| ||||||||| | || || || || || || || ||||||||||| Sbjct 214084 CAACACGGTCGTTCTGCCAGACGGCCACACAAGAGTAGGTGGTACCCAAATCAATACC 214027 >seq117 Length=900065 Score = 161 bits (178), Expect = 1e-34 Identities = 456/694 (66%), Gaps = 16/694 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||| ||| || || || ||||| || || || || | || Sbjct 485425 TCAAAGTCCTCACCACCCAGGTGAGTGTCACCAGCGGTGGCAAGCACCTCGAACACGCCC 485366 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||| | || | ||| |||||||| ||||||||||||||||| | | | | Sbjct 485365 GAGTCAATGGTCAAGAGCGAGACATCAAAGGTACCACCACCCAGGTCGTACACAATGATC 485306 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| | || ||||| || |||||||| |||||||| ||||| || || || Sbjct 485305 TGCGACTCGCCCTC---CTTCTTGTCCAGACCGTATGCGATAGCAGCCGCGGTGGGCTCG 485249 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | || || || | || || ||||| || ||||||| || || || || || Sbjct 485248 TTCACGATCCGGAGGACCTCGAGACCGGCAATCGTACCCGCATCCTTGGTGGCCTGACGC 485189 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | |||||| ||||| ||||| || || ||||| || | |||||| || | || || Sbjct 485188 TGAGCATCGTTGAAGTACGCCGGCACAGTAACGACGGCATGCGTGACCTTGTGGCCCAGG 485129 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT--CGATGAAATCTCTTCAGCCG 7814 || | |||||| | || ||||| || || ||||| || || || || |||| || Sbjct 485128 TAGGCCTCCGCGGTCTCCTTCATCTTTTGCAGCACCATGGCGCTG--ATTTCCTCAGGCG 485071 Query 7815 CAAACTGTTTCGTTTCACCGTTAA-AATCAACTTCAATCATGGGTTTATCCG--CAGCAC 7871 || || | | || || ||| ||| | || || ||| | | | Sbjct 485070 TGAAGACCTTGGGCTGGCCACGAACCGTCACCTTGATAGCCGGCTT--GCCGTTCTTCTC 485013 Query 7872 CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACT 7931 | | | ||| ||| | | ||||| || | | || | || ||| Sbjct 485012 C----ACGAGCTTGAACGGGAAGTGCTTCATGTCCTTCTTCACATCAGCCTCACCCCACT 484957 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | | ||||| |||||||| || || || | ||||| | ||||||| ||| | |||| Sbjct 484956 TGCGACCGATCAGACGCTTGGCGTCGAAGATCGTGTTGTCGGGGTTCTGGGCGGCCTGGT 484897 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 ||||||| ||||| || || ||||| || | | | || || || || ||||| || | Sbjct 484896 TCTTCGCGGCGTCACCAATCAGACGCTCGTCGTCCTTCGAGAAAGCAACATACGAGGGAG 484837 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | | || || || |||||||| ||||||||||| || ||| | | || ||| || | Sbjct 484836 TGATACGGTTACCCTGGTCGTTGGCAATAATTTCAACACGGCCTTGGCGCTGGACACCCA 484777 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | ||||| || || || || | ||||||||||| Sbjct 484776 CACACGAGTAGGTGGTACCCAGGTCAATACCGAT 484743 >seq56 Length=331823 Score = 100 bits (110), Expect = 4e-16 Identities = 139/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||| || || || || || | |||||||| || | |||||||| Sbjct 121163 CCGATCAGACGCTTGGCGTCGAACACGGTCTGGCGAGGGTTCATCGCCGCCTGGTTCTTG 121104 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || | | | || || ||||||||||| || ||||| Sbjct 121103 GCAGCATCACCGATCAGACGCTCGCTCT---CGGTGAAGGCGACGTACGAGGGCGTCGTG 121047 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| |||||||| || || || ||||| ||| || || ||| Sbjct 121046 CGGTTGCCCTGGTCGTTGGCAATAATCTCGACACGCTCGTTGGACCACCAACCCACACAC 120987 Query 8117 GAATACGTTGTTCC 8130 || || || || || Sbjct 120986 GAGTAGGTGGTACC 120973 >seq29 Length=80675 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACAC-GGTTGATTTTCACGTGCCAA 11507 |||||||||||||| |||||||| | ||| ||||||||| || |||||| | ||| Sbjct 64077 TTACCAATCGCATCGATTTCATCCACAAAAATAATACACGGGGACATTTTCTTG-GCCGT 64135 Query 11508 TTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGA 11567 | | || || ||||| |||| || || || || || |||||||| || ||| || Sbjct 64136 TGCGAACATGTCACGCACTCGAGATGGACCAACACCAACGAACATTTCCACAAACTCAGA 64195 Query 11568 CCCCGAACACTGA-ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTG 11626 |||| | || || | || |||||| || |||||| || | || || | ||||| Sbjct 64196 TCCCG-AGACAGACAAGAAGGGAACGCCAGCTTCACCAGCAGTGGCTTTGGCGACAAGTG 64254 Query 11627 TTTTACCTGTACCTGG 11642 | ||||||||||| || Sbjct 64255 TCTTACCTGTACCAGG 64270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131871118280