Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq74 192 7e-44 >seq74 Length=174556 Score = 192 bits (212), Expect = 7e-44 Identities = 573/867 (66%), Gaps = 33/867 (4%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| || || | || ||||| || || ||| | | | Sbjct 135832 CCCTCAGCACATGCTCATGCGTGTTGCTGTAGGCATCCACGGCGAGGATGTGAAGAGCGC 135891 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATG--TTCATCCACGCAACACCAACCCTC 111728 | ||||| ||| || | |||||| | | | |||| ||||| | || ||||| Sbjct 135892 CATCGAGACCTACAACTACATGTCCGA--GAAGGCCTTCACGCACGCGTCGCCGACCCTG 135949 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 |||||||||||||| || | ||||||||||| || |||||| | | ||||| Sbjct 135950 TTCAACGCTGGTACGCCTAACCCCCAAATGTCGTCCTGCTTCCTTGTGAGTATGAAGGAC 136009 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 || || || | || ||||||| ||| |||| || || ||| ||| |||| Sbjct 136010 GACTCGATTGAGGGTATTTACGACACGCTCAAGACCTGCGCTATGATCAGCAAGACGGCT 136069 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTA 111906 || |||||||| || ||||||| | | | |||| || ||| | ||| || | Sbjct 136070 GGCGGTATCGGTCTGAACATCCACAACATTCGTGCCA--CAGGCTCCTACATTGCTGGCA 136127 Query 111907 CAAATGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 | || ||| |||| | |||||| | || ||||| ||||| | ||| ||| ||||| Sbjct 136128 CGAACGGT--GTCAGCAACGGTATTGTGCCGATGCTCCGCGTGTACAACAACACTGCGCG 136185 Query 111965 CTATGTAAACCAAGCTGGGCGTC-GCAAG------GGATCTATCGCAGTCTATCTTGAGC 112017 ||| || |||| ||||| | |||| ||| | | || |||| || |||| Sbjct 136186 CTACGTGGACCA----GGGCGGCAACAAGCGCCCCGGAGCCTTTGCGATCTACCTCGAGC 136241 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||| |||| | | |||||| |||| |||| ||||| ||| | ||||||| Sbjct 136242 CGTGGCACTCGGACGTGTTTGAGTTCATTGACCTGCGCAAGAACCACGGTAAGGAGGAGG 136301 Query 112078 CGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 || |||| ||||| || ||| || || |||||||| || || |||||| | || Sbjct 136302 TGC-GTGCGCGCGACCTGTTCCTGGCCCTGTGGATTCCTGACCTGTTCATGCGCCGCGTC 136360 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 ||| ||| ||| | ||||| || | || || | | || || || || | || | Sbjct 136361 GAGCAGAACGGCGACTGGTCGCTTATGTGCCCTGCCGAGTGCCCGGGCCTGGCTGACTGC 136420 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 || ||||||||||| ||| | ||| |||||||||| || | || |||| ||| Sbjct 136421 TACGGCGAGGAGTTTGATGCCTTGTACGAAAAGTACGAGCGCGAGGGCCGTGCGA-AGCG 136479 Query 112257 -ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 | || | || || || | | ||| | || ||| | || | || | |||||| || | Sbjct 136480 CTCCGT-CAAGGCGCAGAAGCTCTGGTACGCCATTTTGGAGGCCCAGATCGAGACCGGCA 136538 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 || | || || ||||| ||| | |||| ||||| || || ||||| | || Sbjct 136539 ATCCCTTCATCCTGTACAAGGACTCGGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCA 136598 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGAC 112432 ||||||||| || ||||| ||||| |||||| | ||| ||||| || ||||| Sbjct 136599 CGATCAAGAGCTCGAACCTGTGTACCGAAATCATCGAA--TACAGCTCGCCGGACGAGAC 136656 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGC 112459 || ||||| ||||| || || || || Sbjct 136657 TGCCGTGTGCAACCTGGCCTCGATTGC 136683 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239 ||||| || | || ||||| ||||||||||||||| |||||||| || ||| | | Sbjct 123965 GAGCGCCTGGTGGCCTTTGCCGCTGTTGAGGGTATCTTTTTCTCTGGCTCGTTCGCCTCG 123906 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || | |||||||||||||| ||||||||||| ||||| | |||||||| ||||| ||| Sbjct 123905 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTTTCGTTCTCCAATGAGCTCATC 123846 Query 102300 TCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || ||||||||||| || ||| || ||||| Sbjct 123845 TCGCGTGACGAGGGTCTGCACACCGACTTTGC 123814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741492164240