Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq106 152 1e-31 seq111 143 6e-29 >seq106 Length=438498 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||| ||| || || || ||||| ||| ||||| | ||||| || Sbjct 197865 ACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCC 197924 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || |||||||| ||||| || || || ||||| || Sbjct 197925 AGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGG 197984 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| ||||| || ||||| ||| ||||| || ||||||| |||||| Sbjct 197985 ATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTAATCGTCTTC 198044 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || |||||||||||||| Sbjct 198045 CCGGTAAGGGTCTTGACGAACACTTGCAT 198073 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || ||| ||| ||||| |||||||| ||| ||||| | |||||||| Sbjct 106779 ACGAGATGCAGTGTGCTCTCCTTTTGGATATTGTAGTCGCTTAGAGTGCGTCCATCTTCC 106720 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || || || || || || ||||| || ||||| ||||| ||||| || Sbjct 106719 AGCTGCTTACCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTGG 106660 Query 195052 ATTTT 195056 || || Sbjct 106659 ATCTT 106655 >seq111 Length=547826 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || ||||| ||||| ||| || || | || || ||| Sbjct 165925 ACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCG 165866 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || |||||||| ||||||||||| || ||||| || Sbjct 165865 AGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 165806 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || |||||||| || || ||||| || | |||||| Sbjct 165805 ATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTG 165746 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||| || ||||| | |||||| Sbjct 165745 CCAGTCAGAGTCTTGACGAAGATTTGCAT 165717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479936817739