Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq74 232 1e-55 >seq74 Length=174556 Score = 232 bits (256), Expect = 1e-55 Identities = 743/1124 (66%), Gaps = 43/1124 (4%) Strand=Plus/Minus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGT- 221418 || || || ||||||| ||||||||| || ||| | ||| | |||| ||||| Sbjct 137022 GGGCTGCCCTCGTACGTCTCGTAGGGGCCATACTCGGCAGCCAGCTCGCAG--CTGCGCT 136965 Query 221419 -CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAG 221477 ||| || ||||| ||||| ||||| |||||| | ||| || ||||| | | Sbjct 136964 CCAGCGCCGCGTGATAGATAGTCTCGAAGATCTGCACGTTCAGCAGGCGCGCCTCCTG-G 136906 Query 221478 AAGT-GAAGGGCATA-CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 || ||| || ||| | || ||| ||| | || ||||| ||||| || |||||||| Sbjct 136905 CTGTCGAACGG-ATAGCCCATGATCATAAACGCATCCGCCAGACCCTGGACACCGATACC 136847 Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCT-TCTGGCACGGGATAAAAGTTGACG 221593 |||||| | ||| | | |||| || ||||| ||| ||| |||||| || |||||| | Sbjct 136846 GATGGGGCGGTGGCGCATGTTCGA-GCGGCGCGCACTCTC-CACGGGGTAGTAGTTGATG 136789 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||| | |||| | || || ||| ||| ||| |||| Sbjct 136788 TCGATGATGCGGTTCAAGTTCTTGCAAACCACCTTCGACACGTCGTGCAGGCGCTGGAAG 136729 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAA--AAGCGTTTAGGGCAACGC 221711 ||| || | | |||| ||| || ||| ||| || |||||||| Sbjct 136728 TTGTACGTCTTCGAAGCGCCA--GTGC-------CCTCAATGAAG-GTC---GGCAACGC 136682 Query 221712 T-----GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGT 221766 ||||||||| |||||||| ||||||| | | || | ||||| || || Sbjct 136681 AATCGAGGCCAGGTTGCACACGGCAGTCTCGTCCGGCGAGCTGTATTCGATGATTTCGGT 136622 Query 221767 ACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826 ||| ||||| || |||||| || || |||| || || || |||||| ||||| | Sbjct 136621 ACACAGGTTCGAGCTCTTGATCGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCCGA 136562 Query 221827 GTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCA 221886 ||||||||| || || |||||| ||| ||||| | ||| ||| ||| ||| || ||| Sbjct 136561 GTCCTTGTACAGGATGAAGGGATTGCCGGTCTCGATCTGGGCCTCCAAAATGGCGTACCA 136502 Query 221887 GAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945 ||| | |||| || | || | | ||| | |||||| || | | || || Sbjct 136501 GAGCT-TCTGCGCCTTGACGGAGCGCTTCGCACGGCCCTCGCGCTCGTACTTTTCG-TAC 136444 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 | |||| |||||| || ||||| || ||||||| || ||| ||| || |||| Sbjct 136443 AAGGCAT--CAAACTCCTCGCCGTAGCAGTCAGCCAGGCCCGGGCACTCGGCAGGGCACA 136386 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065 | || ||||| ||| | | ||| | ||||||| ||||| || |||||||| | Sbjct 136385 TAAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAGGTCAGGAATCCACAGGG 136326 Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125 || | || || || | | ||| ||||||| |||| ||| || | ||| || | | Sbjct 136325 CCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCAATGA 136266 Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185 ||||||| | ||| | |||||||||||| || |||| || | || ||||| ||||||| Sbjct 136265 ACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATCGCAAAGGCTCCGGGGCGCTTGT 136206 Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGT 222244 |||| ||||| ||||| | | ||| | |||| | | ||| || |||| || | Sbjct 136205 TGCCGCCCTGGTCCACGTAGCGC-GCAGTGTTGTTGTACACGCGGAGCATCGGCACAATA 136147 Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCA 222304 |||||| |||||| ||||| |||||| | || ||| | | ||| ||| Sbjct 136146 CCGTTGCTGACACCGTTCGTGCCAGCAATGTAGGAGCCTGTGGCACGAATGTT-GTGGAT 136088 Query 222305 G-ACATGCCGATACCACC-GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | || |||||||| || | ||| || | |||||| |||||| ||||||| ||||| Sbjct 136087 GTTCAGACCGATACCGCCAGCCGTCTTGC-TGATCATAGCGCAGGTCTTGAGCGTGTCGT 136029 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 || ||||| || ||||| ||||| | ||| || || || |||||||| || | | Sbjct 136028 AAATACCCTCAATCGAGTCGTCCTTCATACTCACAAGGAAGCAGGACGACATTTGGGGGT 135969 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 | | | || ||||| ||||| || || ||||| || ||| Sbjct 135968 TAGGCGTACCAGCGTTGAACAGGGTCGGCGACGCGTGCGTGAAG 135925 Score = 215 bits (238), Expect = 1e-50 Identities = 551/839 (66%), Gaps = 24/839 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | ||| |||||||||||| ||||| || Sbjct 124370 GAGATTTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACCGCCGAGGAGATGGAC 124311 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTC 25590 ||| | |||||| || ||| |||| || | || ||| |||| || ||| | Sbjct 124310 CTGTCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGTCACTTTGTG 124251 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| |||| ||||| || || || || ||||| || |||||||| ||| ||| Sbjct 124250 AGCCACGTCCTGGCTTTCTTCGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTGGAG 124191 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| | || |||||| || ||||| || |||||||| |||||||| Sbjct 124190 CGCTTCAGCGCCGAGGTGCAGGCCGCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATG 124131 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACAT-TACAGACGT 25769 || || || | ||||| ||| || | ||| || || || ||| |||| || Sbjct 124130 ATGGAGAACATTCACTCGGAGACCTACTC---GCTCCTCAT--CG-ACACCTACATCCGC 124077 Query 25770 CGCCGAGAG-AGATCGG----CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGG 25824 | |||| || || || || ||||||||| ||| ||| | ||||| | Sbjct 124076 GAGCCAGAGCAGCGCGAATACCTTTTCAACGCCATCGAGACCATCCCCGTCGTCAAGCAG 124017 Query 25825 AAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTG 25884 ||||| |||||| || |||||| | || |||| |||| ||||| ||| Sbjct 124016 AAGGCCGAGTGGGCGCTGCGTTGGATCTCGGACAAGCGCGCCTCGTTCTCGGAGCGCCTG 123957 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || |||||||| ||||| ||||| ||||||||| || ||||| || | ||||||||| Sbjct 123956 GTGGCCTTTGCCGCTGTTGAGGGTATCTTTTTCTCTGGCTCGTTCGCCTCGATCTTCTGG 123897 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||||||| || | || ||||| ||||||||| | ||| Sbjct 123896 CTCAAGAAGCGTGGTCTCATGCCCGGTCTTTCGTTCTCCAATGAGCTCATCTCGCGTGAC 123837 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064 |||||||| |||| || ||||||||||| | | || |||| ||| | || | Sbjct 123836 GAGGGTCTGCACACCGACTTTGCCTGCCTCTTGTTCA---GCCATTTG---AAGAAGCGC 123783 Query 26065 TCTCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 | || || || || || | || |||| ||||| |||| || ||| |||| ||| Sbjct 123782 GCGCACCCTGACACGGTGAACCGCATTATCACCGAGGCCGTGGCCATTGAGCAGGACTTT 123723 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATAC 26181 | || |||||| | || ||| |||| ||| Sbjct 123722 TTGACCGATGCTCTGCCTGTCTCGCTGATCGGTATGAACGCTCGCCTGATGTGCCAGTAC 123663 Query 26182 ATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241 ||||||| ||||||||||| ||||| | | ||||| | ||| | ||||| || Sbjct 123662 ATTGAGTTTGTGGCCGACCGCCTGCTCGTCAACCTGGGCAACCCCAAGCACTACAACTCG 123603 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 | ||||| || ||||||||||| ||||| ||| | | || ||| | ||||| || || Sbjct 123602 ACGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGA 123544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843441564480