Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq111 118 7e-22 seq106 105 4e-18 >seq111 Length=547826 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||||||||||||||||||||| ||||| ||| |||| | || Sbjct 165928 AGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCC 165869 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || || ||||| | || | ||||||||||| Sbjct 165868 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 165809 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || || ||| || |||| || || ||| Sbjct 165808 TGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTC 165749 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || ||||| || ||||| |||||| Sbjct 165748 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 165716 >seq106 Length=438498 Score = 105 bits (116), Expect = 4e-18 Identities = 156/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | |||||||||||||| ||||| ||||| || |||| |||| Sbjct 197861 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATC 197920 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| || || ||||| | || | ||||||||||| Sbjct 197921 CTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 197980 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || ||||| || || |||| || | ||| || || | ||| || Sbjct 197981 CTGGATCTTGGCCTTGAC--ATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTAATC 198038 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATA 34981 ||||| || || |||||||| || || | |||||| || Sbjct 198039 GTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGTA 198077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692335582423