Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq74 266 5e-65 seq75 136 6e-26 >seq74 Length=174556 Score = 266 bits (294), Expect = 5e-65 Identities = 410/571 (72%), Gaps = 18/571 (3%) Strand=Plus/Minus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 ||||||||||||| || ||| | |||||||| || |||||||| |||||||| Sbjct 124428 CGAGCCGCTGCTGAAGGAGAACAAGTCGCGCTTTGTGCTCTTCCCCATTCGCTACCACGA 124369 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| |||||||| || ||||||||||||||| | |||| Sbjct 124368 GATTTGGCAGATGTAC-AAGAAGGCGGAGGCCTCGTTCTGGACCGCCGAGGAGATGGACC 124310 Query 1455835 TCGGCGCCG-ACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATC 1455890 | | || | || | | |||||| ||| ||| |||| | ||||| || || | Sbjct 124309 T-GTCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGTCACTTTGTG 124251 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 | |||||||| || ||| ||||| || || || ||||| ||||||||||| | Sbjct 124250 AGCCACGTCCTGGC-TTTCTTCGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTGGA 124192 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 ||||| | ||||| || | ||||| || | || ||||| ||||||||| Sbjct 124191 GCGCTTCAGCGCCGAGGTGCAGGCCGCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCAT 124132 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||| ||||| || |||||||||||||| |||||||||||| || || || Sbjct 124131 GATGGAGAACATTCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATCCGCGAGCC 124072 Query 1456071 GGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT-GCCGTCGGTGAGGAAAAAGG 1456129 | || || |||| || ||||||||| || | ||||| || | | | |||| Sbjct 124071 AGAGCAGCGCGAATACCTTTTCAACGCCATCGAGACCATCCCCGTC-GTCAAGCAGAAGG 124013 Query 1456130 CCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186 |||| |||||| || |||||| |||| | | |||||| || | ||||| || Sbjct 124012 CCGAGTGGGCGCTGCGTTGGATCTCGGACAA-GCGCGCCTCG----TTCTCGGAGCGCCT 123958 Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245 || | ||||||||| || ||||| ||||||||||| ||| ||| | | ||||| || Sbjct 123957 GGTGGCCTTTGCCGCTGTTGAGGGTATCTTTTTCTCTGGCTCGTTCGCCTCGATCTTCTG 123898 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 |||||||||||| || ||||||||||||||| Sbjct 123897 GCTCAAGAAGCGTGGTCTCATGCCCGGTCTT 123867 Score = 158 bits (174), Expect = 2e-32 Identities = 372/546 (68%), Gaps = 38/546 (7%) Strand=Plus/Plus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCTC 262938 |||||||||| | | || ||| | || ||||| || |||||||||||||||| Sbjct 137078 TGGGACTGGGCCTCCCTCAAGGCAAAGATTGCCCAGCACGGTTTGCGCAACTCGTTGCTG 137137 Query 262939 GTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGAG 262998 |||||| |||||||||||| |||| |||||| ||||| || |||| |||||| Sbjct 137138 ATGGCGCCTATGCCCACGGCCTCGACCAGTCAGATCTTGGGCTTCAACGAGTGCTTCGAG 137197 Query 262999 GTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAAC 263058 ||| |||||||| |||| |||||| |||||| | || || || ||||||||| Sbjct 137198 CCGTACACCAGCAACATTTACATGCGCCGTGTGCTCGCCGGTGAGTTCCAGGTGGTCAAC 137257 Query 263059 C---GCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGA-CGCC-CGACTTTCGCG 263113 | | | | || | ||| | |||| || ||||| |||| || | ||| | || Sbjct 137258 CCGTGGCTCTTGCGCGAGCTC---GTGGAGCTGGGCCTTTGGAACGACTCGA-TGAAGCA 137313 Query 263114 ACCGGCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCC 263172 | | | |||||| || | |||||| | || ||| || | || ||| Sbjct 137314 AAAGATT-ATTGCG-CATGGCGGCTCGATCCAAA---------ACGTGGCTG-GCATCCC 137361 Query 263173 -GATC---TCAAGGCTCTCTTCAAGACCGTGTGGGAGGT--GCCCAACCGGGTGACCATT 263226 || | ||||||| || | |||||||||||||||| | ||| || ||||| |||| Sbjct 137362 TGACCACATCAAGGCGCTTTACAAGACCGTGTGGGAGATTAGCCAAAA--GGTGATCATT 137419 Query 263227 GATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTC 263286 || |||||||| ||||| | | | ||| |||||||||| |||||| | |||| Sbjct 137420 GACATGGCGGCGGACCGTGGCGCGTTTGTGTGCCAGAGCCAGAGTCTCAACATTCACCTG 137479 Query 263287 GCCGACCCGAC----GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGG 263342 || ||||| || | ||| | |||||||||||| || | ||| || Sbjct 137480 AGCGCGCCGACCTTTGGTC---AGCTT-ACGTCGATGCACTTTTACGGCTGGAAGAAGGG 137535 Query 263343 CCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCAC 263402 ||||||||| ||| ||||| |||||||| || |||||||| | ||||| || ||||| Sbjct 137536 CCTCAAGACCGGCTCCTACTACCTGCGCACGCGCCCCGCTGCGCAGGCCATCCAGTTCAC 137595 Query 263403 CGTCGA 263408 |||||| Sbjct 137596 CGTCGA 137601 Score = 154 bits (170), Expect = 2e-31 Identities = 274/398 (69%), Gaps = 19/398 (5%) Strand=Plus/Plus Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849 |||| ||||| || ||| | |||||||||||||| || | ||| || | Sbjct 135821 GTCGCGGAGCGCCCTCAGCACATGCTCATGCGTGTTGCTGTAGGC----AT--------C 135868 Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTG 259909 ||| ||| ||| || || || ||| |||||| | |||||| || || Sbjct 135869 CACGGCGAGGATG---TGAAGAGCGCCATCGAGACCTACAACTACATGTCCGAGAAGGCC 135925 Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 ||||| ||| |||| || || || || || || ||||| ||| || | ||||| Sbjct 135926 TTCACGCACGCGTCGCCGACCCTGTTCAACGCTGGTACGCCTAACCCCCAAATGTCGTCC 135985 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| || || ||||||| ||| ||||| ||||| || || |||||||||||| Sbjct 135986 TGCTTCCTTGTGAGTATGAAGGACGACTCGATTGAGGGTATTTACGACACGCTCAAGACC 136045 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 ||||| | ||| |||| |||| ||||| |||||| | | ||||| | || ||| Sbjct 136046 TGCGCTATGATCAGCAAGACGGCTGGCGGTATCGGTCTGAACATCCACAACATTCGTGCC 136105 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACG--GCCAGTCCAACGGCCTTGTGCCCATGCTTC 260147 | ||| ||||| | || ||||| |||| | ||| |||||| ||||||| ||||| | Sbjct 136106 ACAGGCTCCTACATTGCTGGCACGAACGGTGTCAG--CAACGGTATTGTGCCGATGCTCC 136163 Query 260148 GCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 |||| | ||| |||| ||||||||||| |||||| || Sbjct 136164 GCGTGTACAACAACACTGCGCGCTACGTGGACCAGGGC 136201 Score = 143 bits (158), Expect = 4e-28 Identities = 186/252 (74%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 || ||| ||||||||| | || ||| | || ||| | | ||| | ||||| || || Sbjct 123758 ATTATCACCGAGGCCGTGGCCATTGAGCAGGACTTTTTGACCGATGCTCTGCCTGTCTCG 123699 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||| |||||||| | || ||||||||||||||||| ||| || |||||||||| Sbjct 123698 CTGATCGGTATGAACGCTCGC-CTGATGTGCCAGTACATTGAGTTT-GTGGCCGACCGCC 123641 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||||| || ||| | ||||||||| || | ||||| || | ||| Sbjct 123640 TGCTCGTCAACCTGGGCAACCCC-AAGCACTACAACTCGACGAACCCCTTTGACTTTATG 123582 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| || |||||| |||||||| | ||||||||||||||||||| || ||| || ||| Sbjct 123581 GAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTATGCC 123522 Query 1456762 AAGGCCGGCGTC 1456773 |||||||| ||| Sbjct 123521 AAGGCCGGTGTC 123510 Score = 138 bits (152), Expect = 2e-26 Identities = 333/501 (66%), Gaps = 19/501 (4%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| ||||||| || |||||||| |||||| || ||||||||| | ||| | Sbjct 136199 GGCGGCAACAAGCGCCCCGGAGCCTTTGCGATCTACCTCGAGCCGTGGCACTCGGACGTG 136258 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | | | | ||||| ||||||||||| |||| ||| || | | |||||| Sbjct 136259 TTTGAGTTCATTGACCTGCGCAAGAACCACGGTAAGG-AGGAGGTGC-----GTGCGCGC 136312 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || || || | |||||||| |||||||| ||||||||| | | | | || Sbjct 136313 GACCTGTTCCTGGCCCTGTGGATTCCTGACCTGTTCATGCGCCGCGTCGAGCAGAACGGC 136372 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 ||||||||||| | ||||| ||||| || |||||| || ||||| |||| || Sbjct 136373 GACTGGTCGCTTATGTGCCCTGCCGAGTGCCCGGGCCTGGCTGACTGCTACGGCGAGGAG 136432 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCG---CGGACCGTCGTGCCC 262084 ||||| ||| | || || || || ||||| | | Sbjct 136433 TTTGATGCCTTGTACGAAAAGTACGAGCGCGAGGGCCGTGCGAAGCGCTCCGTCAAGGC- 136491 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 ||| || || |||||| |||||| | | |||||| ||||||||||||| |||| ||| Sbjct 136492 GCA-GA-AGCTCTGGTACGCCATTTTGGAGGCCCAGATCGAGACCGGCAATCCCTTCATC 136549 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG 262204 | ||||||||| | | ||||| | ||||||||| ||||||| ||||| | | |||| Sbjct 136550 CTGTACAAGGACTCGGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCACGATCA-AGAG 136608 Query 262205 -GCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAA 262263 | |||||||| ||||| ||| || | | ||||| |||| | |||||||| Sbjct 136609 CTCGAACCTGTGTACCGAAATCATCGAATACAGCTCGCCGGACGAGACTGCCGTGTGCAA 136668 Query 262264 CCT---CTCGA--GCGTGGCC 262279 ||| ||||| |||| ||| Sbjct 136669 CCTGGCCTCGATTGCGTTGCC 136689 >seq75 Length=415383 Score = 136 bits (150), Expect = 6e-26 Identities = 176/240 (73%), Gaps = 10/240 (4%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||| ||| |||||| || |||||||||||||||||| || | | ||| Sbjct 360582 TACTCGACCTACATCTACCGTGTCCTCAAGCAGGTGCACCCCGACACTGGT-----ATC- 360529 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| ||||| | ||| | |||||||| || | ||||| |||| ||||||| | Sbjct 360528 TCGAACAAGGCCATGGCCATCCTCAACTCGTTCGTGCAGGACATTTTCGAGCGCATCGCC 360469 Query 725019 ACCGAGGCCGGTCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGA 725076 ||||||||| ||| ||||| ||| ||||||| | ||| ||| |||| |||| Sbjct 360468 ACCGAGGCC--TCGAAGCTGGCCAGCTACAACAAGAAGAGCACCATCTCTTCGCGTGAGA 360411 Query 725077 TCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGG 725136 ||||||| || || ||||||||| | | ||| || ||| | | ||||||| | |||||| Sbjct 360410 TCCAGACGGCTGTCCGCCTGATCCTCCCCGGTGAGCTGTCGAAGCACGCCATTGCCGAGG 360351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177799915134954