Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq111 125 6e-24 seq106 107 2e-18 >seq111 Length=547826 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| ||||||||||| ||| | ||| || |||| || |||||||| || Sbjct 165913 GTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGCTGCTTGCCG 165854 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| ||||| ||||||| ||||| || |||||||||| |||||| ||| Sbjct 165853 GCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 165794 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| || || ||||| | ||||||||| || || |||| ||| Sbjct 165793 ACATTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTC 165734 Query 35720 TTCACAAATATCTGCAT 35736 || || || || ||||| Sbjct 165733 TTGACGAAGATTTGCAT 165717 >seq106 Length=438498 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | || | ||| |||||||| || |||||||| ||| | Sbjct 197847 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 197906 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || ||||||||||| || || || |||| ||||| ||||||| ||| Sbjct 197907 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 197966 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | ||||||| || |||||| Sbjct 197967 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACC 198026 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || ||||| || || || | || || || || | ||||| Sbjct 198027 TCGAGGGTAATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 198073 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || ||| | ||| | || ||||||||||| || ||||| ||| Sbjct 106797 CCACCGCGCAGACGCAGCACGAGATGCAGTGTGCTCTCCTTTTGGATATTGTAGTCGCTT 106738 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||||||||||||| ||||| |||| ||||||||||||| ||| Sbjct 106737 AGAGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGA 106678 Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652 | | ||||||||| |||||| Sbjct 106677 ATCCCTTCCTTGTCCTGGATCTT 106655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792940714360